Description Usage Arguments Value Examples
Plot ecological network organized by trophic level, with node size determined by the node degree, and modules.
1 2 3 |
vertexLabel |
logical plot vertex labels |
vertexSizeFactor |
numeric factor to determine the size of the label with degree |
tk |
TRUE generate an interactive plot using tkplot and returns a matrix with coordinates from |
modules |
if TRUE plot modules in the x axis, obtained with the cluster spinglass algorithm |
lMat |
Matrix of postions for the nodes |
weights |
The weights of the edges for the |
bpal |
if NULL it uses the "RdYlGn" RColorBrewer palette, else must be a vector of colors of length 11. |
maxTL |
maximum trophic level to draw y-axis |
edge.width |
if NULL edge width is fixed in 0.3, if numberic takes into account edge weights multiplied by this value to draw edge widths, the parameter weights determine the behavior. |
... |
Addittional parameters to the plot function |
ig |
igraph object |
returns a plot and if tk==TRUE returns a layout matrix
1 | plot_troph_level(netData[[1]])
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