| CI.delta | Estimate the interaction index as well as its confidence... |
| computeAUC | Calculate AUC from a fitted object |
| computeIC | This function uses rootfinding with fitted curve to compute... |
| computeICvariance | compute variance of IC value at each inhibition percentage... |
| d12_to_dproj | convert d12 = d1+d2 to projected dose sqrt(d1^2+d2^2) in the... |
| d1_to_dproj | convert d1 to projected dose sqrt(d1^2+d2^2) given fixed... |
| d2_to_dproj | convert d2 to projected dose sqrt(d1^2+d2^2) given fixed... |
| datNCI60 | Example raw data for calculating GI50, TGI and LC50 |
| detect_ray_design | Detect if a experiment is fixed-ray design and prepare input... |
| dproj_to_d1 | convert projected dose sqrt(d1^2+d2^2) to d1 given fixed... |
| dproj_to_d2 | convert projected dose sqrt(d1^2+d2^2) to d2 given fixed... |
| drexplorerGUI_1 | Launch Graphical User Interface (GUI) for dose response curve... |
| drexplorerGUI_2 | Launch Graphical User Interface (GUI) for drug interaction... |
| drexplorer-package | Dose-response Explorer |
| drFit | This is a wrapper to fit dose response models from drc and... |
| drFit-class | Class '"drFit"' |
| drModels | Show available dose-response models with direct support. |
| drOutlier | Identifying outliers for dose-response data |
| fHill | The Hill equation function |
| fitHSA_ray | Fit HSA and Bliss model given a fixed ratio design with input... |
| fitHSA_ray_boot | bootstrap of fitHSA_ray to obtain variation of deltaAUC |
| fitIAI | Estimate the interaction index as well as its confidence... |
| fitIAI_mod | Re-implemented IAI calculation with model selection and CI |
| fitIAI_mod0 | Re-implemented IAI calculation with model selection and CI |
| fit_median_efect | Fit median-effect model for 2-drug combination with a fixed... |
| fitOneExp | Fit multiple dose response models for a single drug in a... |
| getNormP | calculate P value assuming avg ~ Normal(mean, sd) |
| getNormPvec | calculate P value assuming avg ~ Normal(mean, sd) |
| hillFit | Fit Hill equation on dose response data |
| lines | lines method for hillFit class |
| lines-methods | lines method for drFit object |
| nci60Fit | Implementation of NCI60 method (GI50, TGI, LC50) for dose... |
| NewmanTables | Table III and IV published by Newman |
| NewmanTest | Identifying outliers with the range to standard deviation... |
| nl22B2 | The drug combination data between SCH66336 and 4-HPR. This is... |
| parse_alpha | common code in fgui |
| plot | plot method for hillFit class |
| plotCCC | Calculates Concordance Correlation Coefficient (CCC) to... |
| plotHSA_ray | plot the ray design from fit object returned by fitHSA_ray |
| plotIAI | Visualize interaction index |
| plotIAI_mod | Plot for the fitted object from model selection |
| plot_median_effect | Generate plot for the fit from median-effect model |
| plot-methods | plot method for drFit object |
| plotOneExp | plot dose response curve from fitOneExp() result |
| predict | predict method for hillFit class |
| predict-methods | predict method for drFit object |
| prepDRdat | prepare dose-reponse data |
| prepDRdat2expInfo | From prepared data to experiment setup information |
| recommendedModels | Frequently used models in drexplorer2 |
| ryegrass | ryegrass dataset from drc package |
| set_dirOutput_ | setup output dir |
| set_dirOutput2_ | setup output dir |
| toget | General getter function for attributes in an object |
| UMSCC22B | The drug combination data of squamous cell carcinoma cells... |
