read_gmt: Read a GMT file

Description Usage Arguments Value Examples

View source: R/enrichment.R

Description

copied ipsis litteris from CEMiTool package.

Usage

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read_gmt(fname)

Arguments

fname

GMT file name.

Value

A list containing genes and description of each pathway

Examples

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# Read example gmt file
gmt_fname <- system.file("extdata", "pathways.gmt", package = "CEMiTool")
gmt_in <- read_gmt(gmt_fname)

lubianat/fcoex documentation built on Aug. 6, 2020, 3:39 a.m.