new_fcoex: Create a fcoex object
In lubianat/fcoex: FCBF-based Co-Expression Networks for Single Cells
Description
Usage
Arguments
Value
Examples
Description
Create a fcoex object
Usage
1
new_fcoex(expression = data.frame(), target = vector())
Arguments
expression
Normalized gene expression table from single-cells
data.frame.
target
Original target classes for the cells (factor).
Value
Object of class fcoex
Examples
1
2
3
4
5
6
# Create new fcoex object
library(SingleCellExperiment)
data("mini_pbmc3k")
targets <- colData(mini_pbmc3k)$clusters
exprs <- as.data.frame(assay(mini_pbmc3k, "logcounts"))
fc <- new_fcoex(exprs, targets)
lubianat/fcoex documentation built on Aug. 6, 2020, 3:39 a.m.
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Description Usage Arguments Value Examples
Description
Create a fcoex object
Usage
1 | new_fcoex(expression = data.frame(), target = vector())
|
Arguments
expression |
Normalized gene expression table from single-cells
|
target |
Original target classes for the cells ( |
Value
Object of class fcoex
Examples
1 2 3 4 5 6 | # Create new fcoex object
library(SingleCellExperiment)
data("mini_pbmc3k")
targets <- colData(mini_pbmc3k)$clusters
exprs <- as.data.frame(assay(mini_pbmc3k, "logcounts"))
fc <- new_fcoex(exprs, targets)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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