recluster: Recluster cells based on fcoex module composition

In lubianat/fcoex: FCBF-based Co-Expression Networks for Single Cells

Description

Recluster cells based on fcoex module composition

Usage

recluster(fc, hclust_method = "ward.D2", dist_method = "manhattan",
  k = 2, verbose = TRUE)

## S4 method for signature 'fcoex'
recluster(fc, hclust_method = "ward.D2",
  dist_method = "manhattan", k = 2, verbose = TRUE)

Arguments

fc	Object of class fcoex
hclust_method	method for the hclust function. Defaults to "ward.D2".
dist_method	method for the dist function. Defaults to "manhattan".
k	desired number of clustes. Defaults to 2.
verbose	Adds verbosity, defaults to TRUE.

Value

Object of class data.frame with new clusters

Examples

data("fc")
fc <- recluster(fc)

lubianat/fcoex documentation built on Aug. 6, 2020, 3:39 a.m.