DEG_Analysis_Micro: Helper Function For DEG Analysis of microArray Data (for a...
In lusystemsbio/NetAct: NetAct -- a computational platform to construct core transcription factor regulatory networks using gene activity
DEG_Analysis_Micro R Documentation
Helper Function For DEG Analysis of microArray Data (for a single comparison)
Description
Helper Function For DEG Analysis of microArray Data (for a single comparison)
Usage
DEG_Analysis_Micro(eset, qval = 0.05)
Arguments
eset
Processed gene expression data in the ExpressionSet format
batch & experimental conditions are provided in pData.
qval
q-value cutoff for DEG analysis (default: 0.05)
Value
DEG result in the format of a list containing:
table: table of DEG results.
rank_vector: a vector of t-statistics for every gene.
degs: a vector of gene symbols for DEGs.
lusystemsbio/NetAct documentation built on Sept. 7, 2024, 8:34 p.m.
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| DEG_Analysis_Micro | R Documentation |
Helper Function For DEG Analysis of microArray Data (for a single comparison)
Description
Helper Function For DEG Analysis of microArray Data (for a single comparison)
Usage
DEG_Analysis_Micro(eset, qval = 0.05)
Arguments
eset |
Processed gene expression data in the ExpressionSet format batch & experimental conditions are provided in pData. |
qval |
q-value cutoff for DEG analysis (default: 0.05) |
Value
DEG result in the format of a list containing: table: table of DEG results. rank_vector: a vector of t-statistics for every gene. degs: a vector of gene symbols for DEGs.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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