View source: R/exploratory_pipeline.R
Apply a bagged clustering procedure to a Seurat object using PCA as input.
1 2 | ClusterBag(dge, k, num_pc = NULL, feature_names = NULL, my_seed = 100,
B = 100, ...)
|
dge |
A Seurat object. |
k |
Number of clusters. (Some may end up empty.) |
num_pc |
Number of PC's to use from dge. Specify this or feature_names, not both. Default 25. |
feature_names |
Fetched via FetchData as input. Specify this or num_pc, not both. Default unused. |
my_seed |
RNG seed. |
B |
Number of bootstrap replicates. |
... |
Additional args passed to clue::cl_bag. |
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