add_pseudotime_to_seurat: Transfer data from a pseudotime modeling object to a Seurat...
In maehrlab/thymusatlastools: Tools for analysis of single-cell transcriptomic data
Description
Transfer data from a pseudotime modeling object to a Seurat object.
Usage
1
add_pseudotime_to_seurat(dge, pt_obj, pt_method = "monocle")
Details
This function takes Seurat object and a finished object from a pseudotime analysis package
It transfers info from the latter to the former, guaranteeing that the Seurat object
will have complete metadata fields of the following names:
'pseudotime', 'branch', 'branch_viz_1', 'branch_viz_2'
maehrlab/thymusatlastools documentation built on May 28, 2019, 2:32 a.m.
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Description
Transfer data from a pseudotime modeling object to a Seurat object.
Usage
1 | add_pseudotime_to_seurat(dge, pt_obj, pt_method = "monocle")
|
Details
This function takes Seurat object and a finished object from a pseudotime analysis package It transfers info from the latter to the former, guaranteeing that the Seurat object will have complete metadata fields of the following names: 'pseudotime', 'branch', 'branch_viz_1', 'branch_viz_2'
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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