DESummaryFast: Quickly compute summary statistics for all genes.
In maehrlab/thymusatlastools: Tools for analysis of single-cell transcriptomic data
View source: R/exploratory_pipeline.R
Description
Quickly compute summary statistics for all genes.
Usage
1
2
DESummaryFast(dge, ident.use = "ident", aggregator = mean,
genes_per_cluster = NULL)
Arguments
dge
Seurat object
ident.use
Any factor variable available via FetchData(dge).
aggregator
Function used to aggregate within clusters. Try 'prop_nz'.
genes_per_cluster
Limit on number of genes returned per cluster.
maehrlab/thymusatlastools documentation built on May 28, 2019, 2:32 a.m.
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View source: R/exploratory_pipeline.R
Description
Quickly compute summary statistics for all genes.
Usage
1 2 | DESummaryFast(dge, ident.use = "ident", aggregator = mean,
genes_per_cluster = NULL)
|
Arguments
dge |
Seurat object |
ident.use |
Any factor variable available via FetchData(dge). |
aggregator |
Function used to aggregate within clusters. Try 'prop_nz'. |
genes_per_cluster |
Limit on number of genes returned per cluster. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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