add_maehrlab_metadata: Given a Seurat object, add information about our experiments.
In maehrlab/thymusatlastools: Tools for analysis of single-cell transcriptomic data
View source: R/data_handling.R
Description
Given a Seurat object, add information about our experiments.
Usage
1
2
add_maehrlab_metadata(dge, variable_to_add, new_name = NULL,
NA_strings = c("NA", ""), maehrlab_metadata = get_metadata())
Details
It looks in 'get_metadata()' for a column named 'variable_to_add' and adds
that variable to @data.info with the
name 'new_name' (default is 'variable_to_add').
It finds the right cells by matching "Sample_ID" to "orig.ident".
maehrlab/thymusatlastools documentation built on May 28, 2019, 2:32 a.m.
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View source: R/data_handling.R
Description
Given a Seurat object, add information about our experiments.
Usage
1 2 | add_maehrlab_metadata(dge, variable_to_add, new_name = NULL,
NA_strings = c("NA", ""), maehrlab_metadata = get_metadata())
|
Details
It looks in 'get_metadata()' for a column named 'variable_to_add' and adds that variable to @data.info with the name 'new_name' (default is 'variable_to_add'). It finds the right cells by matching "Sample_ID" to "orig.ident".
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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