jaspar: The JASPAR transcription factor database in the format...
In matthuska/tRap: A biophysical model for transcription factor binding affinities
Description
Format
Source
References
Description
The JASPAR transcription factor database in the format expected by tRap
Format
A list where each element is a single JASPAR matrix and is named by
the JASPAR accession number
Source
http://jaspar.genereg.net/html/DOWNLOAD/JASPAR_CORE/pfm/nonredundant/pfm_all.txt
References
Sandelin A, Alkema W, Engstrom P, Wasserman WW, Lenhard B.
JASPAR: an open-access database for eukaryotic transcription factor binding profiles.
Nucleic Acids Res. 2004 Jan 1;32(Database issue):D91-4.
matthuska/tRap documentation built on May 21, 2019, 1:23 p.m.
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Description Format Source References
Description
The JASPAR transcription factor database in the format expected by tRap
Format
A list where each element is a single JASPAR matrix and is named by the JASPAR accession number
Source
http://jaspar.genereg.net/html/DOWNLOAD/JASPAR_CORE/pfm/nonredundant/pfm_all.txt
References
Sandelin A, Alkema W, Engstrom P, Wasserman WW, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D91-4.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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