read.jaspar: read a jaspar matrix
In matthuska/tRap: A biophysical model for transcription factor binding affinities
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Description
Load a PWM matrix from Jaspar
Usage
1
Arguments
file
jaspar file for all matrices
Details
Jaspar file for all matrices should have the format as provided by
jaspar: http://jaspar.genereg.net/html/DOWNLOAD/jaspar_CORE/non_redundant/all_species/matrix_only/matrix_only.txt
Value
returns a list of matrices with four rows for A, C, G, T
Author(s)
Matthias Heinig
See Also
matthuska/tRap documentation built on May 21, 2019, 1:23 p.m.
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Description Usage Arguments Details Value Author(s) See Also
Description
Load a PWM matrix from Jaspar
Usage
1 |
Arguments
file |
jaspar file for all matrices |
Details
Jaspar file for all matrices should have the format as provided by jaspar: http://jaspar.genereg.net/html/DOWNLOAD/jaspar_CORE/non_redundant/all_species/matrix_only/matrix_only.txt
Value
returns a list of matrices with four rows for A, C, G, T
Author(s)
Matthias Heinig
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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