Files in michaelwitting/wormLipidPredictR

Lipid reaction prediction based on WormJam

R/create_reaction.R R/create_via_chebi.R R/helper_.add_products.R R/helper_.check_reaction.R R/helper_.create_df_with_template.R R/helper_.create_list_reactants_with_template.R R/helper_.create_substrates_combination.R R/helper_.create_template.R R/helper_parser_lipids.R R/helper_rhea.R R/id_conversion.R R/mappingTable_metabolites.R R/utils.R README.md inst/extdata/lipidmapstools/docs/pdf/CLStr.pdf inst/extdata/lipidmapstools/docs/pdf/CLStrGen.pdf inst/extdata/lipidmapstools/docs/pdf/ChainAbbrev.pdf inst/extdata/lipidmapstools/docs/pdf/ChainStr.pdf inst/extdata/lipidmapstools/docs/pdf/FAStr.pdf inst/extdata/lipidmapstools/docs/pdf/FAStrGen.pdf inst/extdata/lipidmapstools/docs/pdf/GLStr.pdf inst/extdata/lipidmapstools/docs/pdf/GLStrGen.pdf inst/extdata/lipidmapstools/docs/pdf/GPStr.pdf inst/extdata/lipidmapstools/docs/pdf/GPStrGen.pdf inst/extdata/lipidmapstools/docs/pdf/LMAPSStr.pdf inst/extdata/lipidmapstools/docs/pdf/LMStr.pdf inst/extdata/lipidmapstools/docs/pdf/LMStrGen.pdf inst/extdata/lipidmapstools/docs/pdf/README.pdf inst/extdata/lipidmapstools/docs/pdf/SPChainAbbrev.pdf inst/extdata/lipidmapstools/docs/pdf/SPStr.pdf inst/extdata/lipidmapstools/docs/pdf/SPStrGen.pdf inst/extdata/lipidmapstools/docs/pdf/STStr.pdf inst/extdata/lipidmapstools/docs/pdf/STStrGen.pdf inst/extdata/lipidmapstools/docs/pdfa4/CLStr.pdf inst/extdata/lipidmapstools/docs/pdfa4/CLStrGen.pdf inst/extdata/lipidmapstools/docs/pdfa4/ChainAbbrev.pdf inst/extdata/lipidmapstools/docs/pdfa4/ChainStr.pdf inst/extdata/lipidmapstools/docs/pdfa4/FAStr.pdf inst/extdata/lipidmapstools/docs/pdfa4/FAStrGen.pdf inst/extdata/lipidmapstools/docs/pdfa4/GLStr.pdf inst/extdata/lipidmapstools/docs/pdfa4/GLStrGen.pdf inst/extdata/lipidmapstools/docs/pdfa4/GPStr.pdf inst/extdata/lipidmapstools/docs/pdfa4/GPStrGen.pdf inst/extdata/lipidmapstools/docs/pdfa4/LMAPSStr.pdf inst/extdata/lipidmapstools/docs/pdfa4/LMStr.pdf inst/extdata/lipidmapstools/docs/pdfa4/LMStrGen.pdf inst/extdata/lipidmapstools/docs/pdfa4/README.pdf inst/extdata/lipidmapstools/docs/pdfa4/SPChainAbbrev.pdf inst/extdata/lipidmapstools/docs/pdfa4/SPStr.pdf inst/extdata/lipidmapstools/docs/pdfa4/SPStrGen.pdf inst/extdata/lipidmapstools/docs/pdfa4/STStr.pdf inst/extdata/lipidmapstools/docs/pdfa4/STStrGen.pdf inst/extdata/load_rhea_datasets.R man/create_reaction_adjacency_matrix.Rd man/create_reactions.Rd man/create_via_chebi.Rd man/dot-add_products.Rd man/dot-check_colnames_substrates_combinations.Rd man/dot-check_reaction.Rd man/dot-create_df_with_template.Rd man/dot-create_list_products_df_with_template.Rd man/dot-create_reaction.Rd man/dot-create_substrates_combinations.Rd man/dot-create_template.Rd man/find_RHEA_ids_from_SMILES.Rd man/find_RHEA_ids_from_ids.Rd man/getRheaIDsFromProteinID.Rd man/isolate_radyls.Rd man/mappingTable.Rd man/obtain_substrates_products.Rd man/r_GPStrGen.Rd man/select_substrates_or_products.Rd man/translate_ChEBI_to_SMILES.Rd man/translate_id_to_ChEBI.Rd tests/testthat.R tests/testthat/test_create_reaction.R tests/testthat/test_create_via_chebi.R tests/testthat/test_helper_.add_products.R tests/testthat/test_helper_.check_reaction.R tests/testthat/test_helper_.create_df_with_template.R tests/testthat/test_helper_.create_list_reactants_with_template.R tests/testthat/test_helper_.create_substrates_combination.R tests/testthat/test_helper_.create_template.R tests/testthat/test_helper_rhea.R tests/testthat/test_id_conversion.R tests/testthat/test_parser_lipids.R tests/testthat/test_utils.R vignettes/LipidNetworkPredictR.Rmd vignettes/LipidNetworkPredictR_manual.Rmd vignettes/LipidNetworkPredictR_with_reaction_order.Rmd