summarize_phyloseq: Summarize phyloseq object
In microbiome/microbiome: Microbiome Analytics
View source: R/summarize_phyloseq.R
summarize_phyloseq R Documentation
Summarize phyloseq object
Description
Prints basic information of data.
Usage
summarize_phyloseq(x)
Arguments
x
Input is a phyloseq-class object.
Details
The summarize_phyloseq function will give information on weather
data is compositional or not, reads (min. max, median, average),
sparsity,
presence of singletons and sample variables.
Value
Prints basic information of phyloseq-class object.
Author(s)
Contact: Sudarshan A. Shetty sudarshanshetty9@gmail.com
Examples
data(dietswap)
summarize_phyloseq(dietswap)
microbiome/microbiome documentation built on Aug. 22, 2023, 7:12 a.m.
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View source: R/summarize_phyloseq.R
| summarize_phyloseq | R Documentation |
Summarize phyloseq object
Description
Prints basic information of data.
Usage
summarize_phyloseq(x)
Arguments
x |
Input is a |
Details
The summarize_phyloseq function will give information on weather data is compositional or not, reads (min. max, median, average), sparsity, presence of singletons and sample variables.
Value
Prints basic information of phyloseq-class object.
Author(s)
Contact: Sudarshan A. Shetty sudarshanshetty9@gmail.com
Examples
data(dietswap)
summarize_phyloseq(dietswap)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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