top_taxa: Top Taxa
In microbiome/microbiome: Microbiome Analytics
top_taxa R Documentation
Top Taxa
Description
Return n most abundant taxa (based on total abundance over
all samples), sorted by abundance
Usage
top_taxa(x, n = ntaxa(x))
Arguments
x
phyloseq object
n
Number of top taxa to return (default: all)
Value
Character vector listing the top taxa
Examples
data(dietswap)
topx <- top_taxa(dietswap, n=10)
microbiome/microbiome documentation built on Aug. 22, 2023, 7:12 a.m.
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| top_taxa | R Documentation |
Top Taxa
Description
Return n most abundant taxa (based on total abundance over all samples), sorted by abundance
Usage
top_taxa(x, n = ntaxa(x))
Arguments
x |
phyloseq object |
n |
Number of top taxa to return (default: all) |
Value
Character vector listing the top taxa
Examples
data(dietswap)
topx <- top_taxa(dietswap, n=10)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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