plot_deg_heatmap: plot_deg_heatmap

In miracum/clearly-sigident.func: Sigident Functional Analysis

plot_deg_heatmap

Description

Helper function to create DEG heatmap

Usage

plot_deg_heatmap(mergeset, genes, patientcolors, filename = NULL)

Arguments

mergeset	A matrix of merged expression sets (rows = genes, columns = samples). The output of the funtion 'sigident.preproc::load_geo_data()'.
genes	A object. The output of the function 'identify_degs()'.
patientcolors	A object. The ouput of the function 'color_heatmap()'.
filename	A character string indicating the filename. If default (NULL) a plot named 'DEG_heatmap.png' will be created inside the directory "./plots".

miracum/clearly-sigident.func documentation built on June 28, 2022, 3:16 p.m.