Files in mknoll/cmoRe
Analysis of CellProfiler acquired data for disease profiling and drug discovery.
DESCRIPTION
NAMESPACE
R/addCutoffData.R
R/addCutoffVars.R
R/aggregateByWell.R
R/analysisCellCycleFractions.R
R/analyze.R
R/analyzeNLME.R
R/analyzeTAVI.R
R/assignCellCycle.R
R/assignCellCycle.R.bak
R/assignCellCycleSimple.R
R/assignCutoff.R
R/assignFibro.R
R/assignFibroSimple.R
R/assignNcFilterRes.R
R/assignNcFilterResSimple.R
R/calculateSyntheticVars.R
R/cellCycleFractIntegrDNAInt.R
R/classAssignment.R
R/corBetweenRep.R
R/createAdditionalVars.R
R/createCutoffs.R
R/createCutoffs.R.bak
R/findClusters.R
R/flatten.R
R/imgExperimentClass.R
R/imputeMissingCutoffs.R
R/intersectLmeCor.R
R/linearDecomposition.R
R/lmeKoVsTreatment.R
R/medianAgg.R
R/ncAreaFilter.R
R/plotClusters.R
R/plotCorrelationMatrix.R
R/plotVerlauf.R
R/qc.R
R/radarPlots.R
R/readData.R
R/readData.R.bak
R/readSingleCol.R
R/sumAgg.R
R/zTransform.R
inst/extdata/run1_1/Cells.txt
inst/extdata/run1_1/Cytoplasm.txt
inst/extdata/run1_1/Primarieswithoutborder.txt
inst/extdata/run1_1/Treatment.csv
inst/extdata/run1_2/Cells.txt
inst/extdata/run1_2/Cytoplasm.txt
inst/extdata/run1_2/Primarieswithoutborder.txt
inst/extdata/run1_2/Treatment.csv
inst/extdata/run2_1/Cells.txt
inst/extdata/run2_1/Cytoplasm.txt
inst/extdata/run2_1/Primarieswithoutborder.txt
inst/extdata/run2_1/Treatment.csv
inst/extdata/run2_2/Cells.txt
inst/extdata/run2_2/Cytoplasm.txt
inst/extdata/run2_2/Primarieswithoutborder.txt
inst/extdata/run2_2/Treatment.csv
man/addCutoffVars.Rd
man/addCutoffs.Rd
man/addVars.Rd
man/agg.Rd
man/aggregateByWell.Rd
man/analysisCCFractions.Rd
man/analyze.Rd
man/analyzeCC.Rd
man/analyzeNLME.Rd
man/analyzeTAVI.Rd
man/assignCellCycle.Rd
man/assignCellCycleSimple.Rd
man/assignCutoff.Rd
man/assignCutoffSimple.Rd
man/assignFibroSimple.Rd
man/assignFibroblast.Rd
man/assignNcFilterRes.Rd
man/assignNcFilterResSimple.Rd
man/calc.Rd
man/calcCutoffs.Rd
man/calcFract.Rd
man/calculateSyntheticVars.Rd
man/cellCycleFractIntegrDNAInt.Rd
man/checkFilter.Rd
man/classAssignment.Rd
man/corBetweenRep.Rd
man/createAdditionalVars.Rd
man/drawRadarplots.Rd
man/filter.Rd
man/findClusters.Rd
man/flatten.Rd
man/fractAgg.Rd
man/getData.Rd
man/getLog.Rd
man/getNRows.Rd
man/getResiduals.Rd
man/imageExp-class.Rd
man/imputeMC.Rd
man/initialize-imageExp-method.Rd
man/intersectLmeCor.Rd
man/intersectLmeCorDynamic.Rd
man/linearDecomp.Rd
man/lmeKoVsTreatment.Rd
man/medianAgg.Rd
man/ncAreaFilter.Rd
man/plotClusters.Rd
man/plotCorrelationMatrix.Rd
man/plotVerlauf.Rd
man/qc.Rd
man/qcPlots.Rd
man/readData.Rd
man/readSingleCol.Rd
man/removeRawData.Rd
man/sumAgg.Rd
man/transformVars.Rd
man/zTrans.Rd
man/zTransform.Rd
src/read.c
vignettes/cmoRe.Rmd
