analyze: Analyze data

In mknoll/cmoRe: Analysis of CellProfiler acquired data for disease profiling and drug discovery.

Analyze data

Description

TAVI data analysis, consinstig of a linear mixed effect modelling approach with cross validation.

Usage

analyze(
  data,
  frm = as.formula(VAL ~ GRP + DOSE + (1 | VERSUCH/PLATTE/TREATMENT)),
  frm0 = as.formula(VAL ~ 1 + (1 | VERSUCH/PLATTE/TREATMENT)),
  ref = "Ko_1",
  nCores = NULL,
  trSep = "_"
)

Arguments

data	data.frame as obtained by the aggregateByWell() or zTransform() functions
frm	Formula to use with lme4::lmer
frm0	Null-model formula
ref	Reference level of the GRP variable

mknoll/cmoRe documentation built on Nov. 18, 2022, 4:01 p.m.