assignCellCycle: Assigns Cell-Cycle Status to each cell

In mknoll/cmoRe: Analysis of CellProfiler acquired data for disease profiling and drug discovery.

Assigns Cell-Cycle Status to each cell

Description

A

Usage

assignCellCycle(
  data,
  calc,
  type = "CImedian",
  var = "Intensity_IntegratedIntensity_DNA.nucl",
  nCores = NULL,
  ...
)

Arguments

data	data
calc	Data calculated with cellCycleFractIntegrDNAInt()
type	Method on how to assign cell cycle status to each cell. CIexcl assigns only cells with values outside the confidence interval for the separating value determined in cellCycleFractIntegrDNAInt() by bootstrapping. CImedian uses the median as cutoff.

mknoll/cmoRe documentation built on Nov. 18, 2022, 4:01 p.m.