Files in mlist/SPONGE
Sparse Partial Correlations On Gene Expression

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/data.R R/fn_benchmark.R R/fn_elastic_net.R R/fn_gene_miRNA_F_test.R R/fn_gene_miRNA_regression_models.R R/fn_network_centralities.R R/fn_plot_simulation_results.R R/fn_plots.R R/fn_significance.R R/fn_simulation.R R/fn_sparc.R R/fn_subsampling.R README.md
SPONGE.Rproj
data/ceRNA_interactions.RData
data/gene_expr.RData
data/mir_expr.RData
data/mir_family_info.RData
data/mir_interactions.RData
data/mircode.RData
data/mircode_noncoding_high_conservation.RData
data/scor_simulation_cov_matrices.RData
data/targetscan.RData
inst/extdata/miR_Family_Info.txt
man/ceRNA_interactions.Rd man/cov.matrices.Rd man/fn_elasticnet.Rd man/fn_gene_miRNA_F_test.Rd man/fn_get_model_coef.Rd man/fn_get_rss.Rd man/fn_get_shared_miRNAs.Rd man/fn_map_mimats_to_mir.Rd man/gene_expr.Rd man/genes_pairwise_combinations.Rd man/mir_expr.Rd man/mir_family_info.Rd man/mir_interactions.Rd man/mircode.Rd man/mircode_noncoding.Rd man/sample_zero_mscor_cov.Rd man/sample_zero_mscor_data.Rd man/sponge.Rd man/sponge_build_null_model.Rd man/sponge_compute_p_values.Rd man/sponge_edge_centralities.Rd man/sponge_gene_miRNA_interaction_filter.Rd man/sponge_network.Rd man/sponge_node_centralities.Rd man/sponge_plot_network.Rd man/sponge_plot_network_centralities.Rd man/sponge_plot_simulation_results.Rd man/sponge_run_benchmark.Rd man/sponge_subsampling.Rd man/targetscan.Rd
sponge_logo.svg
tests/testthat/test_sponge.R vignettes/SPONGE.Rmd
vignettes/SPONGE.html
vignettes/overview.png
vignettes/sponge_logo.png
vignettes/sponge_logo.svg
mlist/SPONGE documentation built on July 30, 2017, 1:10 p.m.