target_edge_list: Edges adjacent to target nodes
In molnet-org/molnet: Predicting Differential Drug Response using Multi-Omics Networks
Description
Usage
Arguments
Value
Description
(INTERNAL) Based on the supplied graph and target nodes this function returns a
list of edges that are directly adjacent to target nodes. These edges can be used for further
computation to find differential scores in the networks.
Usage
1
target_edge_list(graph, target_nodes, group)
Arguments
graph
Combined graph (iGraph graph object) for a specific group
target_nodes
Data frame. Has column 'node_id' (unique node IDs in the iGraph graph
object that are targeted by drugs) and columns 'group1' and 'group2' (boolean values specifying
whether the node is contained in the combined graph of the group)
group
Character. Indicates which group is analyzed.
Value
An edge list as a data frame.
molnet-org/molnet documentation built on Dec. 21, 2021, 8:59 p.m.
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Description Usage Arguments Value
Description
(INTERNAL) Based on the supplied graph and target nodes this function returns a list of edges that are directly adjacent to target nodes. These edges can be used for further computation to find differential scores in the networks.
Usage
1 | target_edge_list(graph, target_nodes, group)
|
Arguments
graph |
Combined graph (iGraph graph object) for a specific group |
target_nodes |
Data frame. Has column 'node_id' (unique node IDs in the iGraph graph object that are targeted by drugs) and columns 'group1' and 'group2' (boolean values specifying whether the node is contained in the combined graph of the group) |
group |
Character. Indicates which group is analyzed. |
Value
An edge list as a data frame.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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