dot-hiearchy_map: Plot hiearchy map
In montilab/hypeR: An R Package For Geneset Enrichment Workflows

.hiearchy_map

R Documentation

Plot hiearchy map

Plot hiearchy map

.hiearchy_map(
  hyp_df,
  rgsets_obj,
  pval_cutoff = 1,
  fdr_cutoff = 1,
  val = c("fdr", "pval"),
  top = NULL,
  title = "",
  graph = FALSE
)

`hyp_df`	A dataframe from a hyp object
`rgsets_obj`	A relatonal geneset from a hyp object
`pval_cutoff`	Filter results to be less than pval cutoff
`fdr_cutoff`	Filter results to be less than fdr cutoff
`val`	Choose significance value displayed when hovering nodes e.g. c("fdr", "pval")
`top`	Limit number of pathways shown
`title`	Plot title
`graph`	Return an igraph object instead