get_edge_betweenness: Return edge between cluster data

In mselensky/bngal: Biological Network Graphing and Learning

Return edge between cluster data

Description

This is a wrapper around igraph::cluster_edge_betweenness(). This can be a memory- and time-intensive operation, especially for lower taxonomic levels. In this wrapper, edge betweenness is processed in parallel for each subcommunity by default in an attempt to ease runtime requirements. For larger matrices of a single community, consider using parallel::mcmapply() around igraph::cluster_edge_betweenness() to increase computational efficiency (support coming soon).

Usage

get_edge_betweenness(igraph.list)

Arguments

igraph.list

Output from get_igraph()

Details

Before running this function, consider

Examples

get_igraph_output <- bngal::get_igraph(prepro_data)
get_edge_betweenness(get_igraph_output)

mselensky/bngal documentation built on June 3, 2024, 6:27 a.m.