senspec: True and false positive rates

In mskcc/tempoSig: Maximum Likelihood Fitting of Mutational Catalogs and De Novo Inference of Signatures

True and false positive rates

Description

From supplied exposure prediction and actual vectors, compute true and false positive rates

Usage

senspec(xhat, x, pvalue = NULL, alpha = 0.05)

Arguments

xhat	Predicted exposure vector
x	True exposure vector
pvalue	Vector of prediction p-values
alpha	False positive rate threshold

Value

list of vectors tp (true positives), fp (false positives), all positives positives and negatives negatives in names of xhat

mskcc/tempoSig documentation built on Feb. 3, 2023, 8:35 a.m.