ggDendrogram_MSF: Function that prints a dendogram using ggplot. Was modified...

In mssm-msf-2019/BiostatsALL:

Description

Function that prints a dendogram using ggplot. Was modified from ggdendrogram . Refer to ggdendro package http://www.icesi.edu.co/CRAN/web/packages/ggdendro/vignettes/ggdendro.pdf . Full description of how to print dendograms here: http://rstudio-pubs-static.s3.amazonaws.com/1876_df0bf890dd54461f98719b461d987c3d.htmlThe correlation coeficient appears in the lower diagonal and the p-values based * are in the upper diagonal.

Usage

ggDendrogram_MSF(data, segments = TRUE, labels = TRUE, leaf_labels = TRUE,
  rotate = FALSE, theme_dendro = TRUE, size = 12, ...)

Arguments

segments	If TRUE, show line segments
labels	if TRUE, shows segment labels
leaf_labels	if TRUE, shows leaf labels
rotate	if TRUE, rotates plot by 90 degrees
theme_dendro	if TRUE, applies a blank theme to plot (see theme_dendro)
...	other parameters passed to geom_text
Either	a dendro object or an object that can be coerced to class dendro using the dendro_data function, i.e. objects of class dendrogram, hclust or tree

Examples

ggDendrogram_MSF(DATA, rotate=FALSE)

mssm-msf-2019/BiostatsALL documentation built on May 22, 2019, 12:16 p.m.