mosdepth: mosdepth
In msubirana/ergWgsTools: What the Package Does (One Line, Title Case)

Fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

1	mosdepth(inputFile, threads, outPath)

`inputFile`	Path of the fastq file to apply depth calculation.
`threads`	Specify number of threads to use .
`outPath`	Path where the output of the analysis will be saved.

## Not run: 
inputFile <- 'raw/sample.bam'
ref <- 'ref/hg38.fa'
outPath <- 'rst/coverage'
threads <- 2

mosdepth(inputFile, threads, outPath)

## End(Not run)