filterSamples: Filter samples

In netZoo/netZooR: Unified methods for the inference and analysis of gene regulatory networks

Filter samples

Description

Filter samples

Usage

filterSamples(obj, ids, groups = colnames(obj), keepOnly = FALSE)

Arguments

obj	ExpressionSet object.
ids	Names found within the groups labels corresponding to samples to be removed
groups	Vector of labels for each sample or a column name of the phenoData slot for the ids to filter. Default is the column names.
keepOnly	Filter or keep only the samples with those labels.

Value

Filtered ExpressionSet object

Examples

data(skin)
filterSamples(skin,ids = "Skin - Not Sun Exposed (Suprapubic)",groups="SMTSD")
filterSamples(skin,ids=c("GTEX-OHPL-0008-SM-4E3I9","GTEX-145MN-1526-SM-5SI9T"))

netZoo/netZooR documentation built on Oct. 16, 2024, 10:23 p.m.