sambarCorgenelength: Normalize gene mutation scores by gene length.

In netZoo/netZooR: Unified methods for the inference and analysis of gene regulatory networks

Normalize gene mutation scores by gene length.

Description

Normalize gene mutation scores by gene length.

Usage

sambarCorgenelength(x, cagenes, exonsize)

Arguments

x	Mutation data, in the format of a matrix, including the number of mutations for samples (rows) and genes (columns).
cagenes	A vector of genes, for example of cancer-associated genes. This will be used to subset the gene-level mutation data to.
exonsize	A vector of gene lengths. This will be used to normalize the gene mutation scores.

Value

Mutation rate-adjusted gene mutation scores.

netZoo/netZooR documentation built on June 8, 2024, 6:20 a.m.