neurogenomics/PeakyFinders: Mining, Calling, and Importing Epigenomic Peaks in R

Contains flexible and user-friendly functions to find, import, and harmonise epigenomic peaks data from **GEO**, **ENCODE**, **ROADMAP**, and **AnnotationHub**. Efficiently imports multiple peak files in one function call (either genome-wide or specific regions) using parallelisation. When peaks are not available, automatically calls peaks from *bedGraph* or *bigWig* files.

README.md

Vignettes Man pages API and functions Files

Package details
Bioconductor views	DataImport FunctionalGenomics Genetics SystemsBiology WholeGenome
Maintainer
License	GPL-3
Version	0.99.4
URL	https://github.com/neurogenomics/PeakyFinders
Package repository	View on GitHub
Installation	Install the latest version of this package by entering the following in R: `install.packages("remotes") remotes::install_github("neurogenomics/PeakyFinders")`