prepare4aheatmap: given a mat and phenoDat and barColList, calculates...

Description Usage Arguments Value

View source: R/aheatmap.R

Description

given a mat and phenoDat and barColList, calculates sampleAnno and annoCols that can be directly passed to aheatmap

Usage

1
prepare4aheatmap(mat, phenoDat, barColList = NULL)

Arguments

mat

the main mat for heatmap

phenoDat

pheno data frame

barColList

column bar color list. This should be a list of color vectors (the color pallete). By default, this is set as NULL, which means getDefaultBarColList() will be called to set the default values.

Value

a list for aheatmap visualization


nickytong/GenAnalysis documentation built on July 20, 2019, 8:57 a.m.