testree.phm: testree method for class phm

Description Usage Arguments Value

View source: R/aheatmat.R

Description

this function test row tree or column tree with specified pheno/gpheno data

Usage

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## S3 method for class 'phm'
testree(obj, orientation = "column", bar = NULL, k = 3,
  h = NULL, plot = TRUE)

Arguments

obj

an phm object

orientation

specify what tree to test with, row or column

bar

column name to specify the pheno data (column of pheno or gpheno)

k

k as in cutree

h

h as in cutree

plot

whether to draw a figure or just test result

Value

test result or nothing


nickytong/GenAnalysis documentation built on July 20, 2019, 8:57 a.m.