Files in nlmixrdevelopment/RxODE
Facilities for Simulating from ODE-Based Models

.Rbuildignore

.covrignore

.github/.gitignore

.github/workflows/R-CMD-check.yaml

.github/workflows/covr.yaml

.github/workflows/pkgdown.yaml

.gitignore

.lintr

BinaryFiles

DESCRIPTION

LICENSE

NAMESPACE

NEWS.md R/DollarNames.R R/RcppExports.R R/RxODE-win-setup.R R/RxODE.R R/confint.R R/dsl.R R/et.R R/etTran.R R/format.R R/genShinyApp.template.R R/geom-amt.R R/geom-cens.R R/modlib.R R/plot.R R/print.R R/progress.R R/reexport.R R/register-s3.R R/rxCbindStudyIndividual.R R/rxFormat.R R/rxIndLin.R R/rxJacobian.R R/rxLinCmt.R R/rxOptExpr.R R/rxParams.R R/rxPrune.R R/rxReservedKeywords.R R/rxShiny.R R/rxSymInv.R R/rxSyntaxFunctions.R R/rxValidate.R R/rxode-options.R R/rxrandom.R R/rxsolve.R R/str.R R/summary.R R/symengine.R R/units.R R/utils.R R/version.R README.Rmd README.md RxODEintro.pdf

_pkgdown.yml

authors.md build/buildRxODE.R build/depends.R build/dual.R build/refresh.R build/sensitivites.R

cleanup

cleanup.win

codecov.yml

codemeta.json

configure

configure.win

cran-comments.md

data/rxReservedKeywords.rda

data/rxSyntaxFunctions.rda

demo/00Index

demo/demo1.R

inst/CITATION

inst/COPYRIGHTS

inst/Changes.txt

inst/THANKS

inst/WORDLIST

inst/include/RxODE.h

inst/include/RxODE_RcppExports.h

inst/include/RxODE_as.h

inst/include/RxODE_control.h

inst/include/RxODE_model_shared.c

inst/include/RxODE_model_shared.h

inst/include/RxODE_types.h

inst/po/en@quot/LC_MESSAGES/R-RxODE.mo

inst/po/en@quot/LC_MESSAGES/RxODE.mo

inst/tools/workaround.R

inst/tran.g

inst/tutorials/RxODE00syntax/RxODE00syntax.Rmd

inst/tutorials/RxODE00syntax/images/expandTutorial.png

inst/tutorials/RxODE01events/images/expandTutorial.png

inst/tutorials/RxODE01events/rxode01events.Rmd inst/tutorials/RxODE99-Intro2020/RxODE99-Intro2020.Rmd inst/workaround.R

logo.png

man-roxygen/birthdayProblem.R man-roxygen/etExamples.R man-roxygen/rmdhunks/RxODE-install-hunk.Rmd man-roxygen/rmdhunks/RxODE-wt.Rmd man-roxygen/rmdhunks/covariates.Rmd man-roxygen/rmdhunks/model-types.Rmd

man-roxygen/rmdhunks/nesting.Rmdh

man-roxygen/rmdhunks/packages.Rmdh

man-roxygen/rmdhunks/pipeline.Rmdh

man-roxygen/rmdhunks/prior-data.Rmd man-roxygen/rmdhunks/related-R-chunk.Rmd man-roxygen/rmdhunks/shiny.Rmd man-roxygen/rmdhunks/sim-var.Rmd

man-roxygen/rmdhunks/single-subject.Rmdh

man-roxygen/rmdhunks/speed.Rmdh

man-roxygen/rmdhunks/stiff.Rmdh

man-roxygen/rmdhunks/transit-compartments.Rmdh

man/RxODE.Rd man/add.dosing.Rd man/add.sampling.Rd man/as.et.Rd man/coef.RxODE.Rd man/cvPost.Rd man/dot-clearPipe.Rd man/dot-rxGenFoce.Rd man/dot-rxWithOptions.Rd man/dot-rxWithSink.Rd man/dot-rxWithWd.Rd man/dot-s3register.Rd man/dot-setWarnIdSort.Rd man/et.Rd man/etExpand.Rd man/etRbind.Rd man/etRep.Rd man/etSeq.Rd man/etTrans.Rd man/eventTable.Rd

man/figures/README-intro-central-1.png

man/figures/README-intro-effect-1.png

man/figures/README-unnamed-chunk-14-1.png

man/figures/README-unnamed-chunk-15-1.png

man/findLhs.Rd man/forderForceBase.Rd man/gammap.Rd man/gammapDer.Rd man/gammapInv.Rd man/gammaq.Rd man/gammaqInv.Rd man/genShinyApp.template.Rd man/getRxThreads.Rd man/guide_none.Rd man/invWR1d.Rd man/is.rxEt.Rd man/is.rxSolve.Rd man/logit.Rd man/lowergamma.Rd man/phi.Rd man/plus-.rxSolve.Rd man/print.RxODE.Rd man/print.rxCoef.Rd man/print.rxDll.Rd man/probit.Rd man/rLKJ1.Rd man/reexports.Rd man/rinvchisq.Rd man/rmdhunks/RxODE-datasets.Rmd man/rmdhunks/RxODE-intro-chunk.Rmd man/rmdhunks/RxODE-syntax-hunk.Rmd man/rmdhunks/rxode-cmt-assign.Rmd man/rmdhunks/rxode-cmt-preassign-1.Rmd man/rmdhunks/rxode-cmt-preassign-2.Rmd man/rxAllowUnload.Rd man/rxAssignPtr.Rd man/rxBlockZeros.Rd man/rxC.Rd man/rxCat.Rd man/rxCbindStudyIndividual.Rd man/rxChain.Rd man/rxChain2.Rd man/rxClean.Rd man/rxCompile.Rd man/rxCondition.Rd man/rxCreateCache.Rd man/rxD.Rd man/rxDelete.Rd man/rxDerived.Rd man/rxDfdy.Rd man/rxDll.Rd man/rxDynLoad.Rd man/rxDynUnload.Rd man/rxEvid.Rd man/rxExpandGrid.Rd man/rxExpandIfElse.Rd man/rxForget.Rd man/rxFun.Rd man/rxGenSaem.Rd man/rxGetLin.Rd man/rxGetModel.Rd man/rxGetRxODE.Rd man/rxHtml.Rd man/rxIndLinState.Rd man/rxIndLinStrategy.Rd man/rxInits.Rd man/rxInv.Rd man/rxIs.Rd man/rxIsCurrent.Rd man/rxIsLoaded.Rd man/rxLhs.Rd man/rxLock.Rd man/rxMd5.Rd man/rxModelVars.Rd man/rxModels_.Rd man/rxNorm.Rd man/rxOptExpr.Rd man/rxParams.Rd man/rxParseErr.Rd man/rxParsePk.Rd man/rxParsePred.Rd man/rxPhysicalDrives.Rd man/rxPkg.Rd man/rxPp.Rd man/rxProgress.Rd man/rxPrune.Rd man/rxRandNV.Rd man/rxRateDur.Rd man/rxReload.Rd man/rxReq.Rd man/rxReservedKeywords.Rd man/rxRmvn.Rd man/rxS.Rd man/rxSEinner.Rd man/rxSetIni0.Rd man/rxSetProd.Rd man/rxSetProgressBar.Rd man/rxSetSeed.Rd man/rxSetSilentErr.Rd man/rxSetSum.Rd man/rxSetupIni.Rd man/rxSetupScale.Rd man/rxShiny.Rd man/rxSimThetaOmega.Rd man/rxSolve.Rd man/rxSolveFree.Rd man/rxSplitPlusQ.Rd man/rxStack.Rd man/rxState.Rd man/rxSumProdModel.Rd man/rxSupportedFuns.Rd man/rxSuppressMsg.Rd man/rxSymInvChol.Rd man/rxSymInvCholCreate.Rd man/rxSymInvCholN.Rd man/rxSyncOptions.Rd man/rxSyntaxFunctions.Rd man/rxTempDir.Rd man/rxTheme.Rd man/rxToSE.Rd man/rxTrans.Rd man/rxUnloadAll.Rd man/rxUse.Rd man/rxValidate.Rd man/rxVersion.Rd man/rxWinSetup.Rd man/rxbeta.Rd man/rxbinom.Rd man/rxcauchy.Rd man/rxchisq.Rd man/rxexp.Rd man/rxf.Rd man/rxgamma.Rd man/rxgeom.Rd man/rxnormV.Rd man/rxodeTest.Rd man/rxpois.Rd man/rxt.Rd man/rxunif.Rd man/rxweibull.Rd man/stat_amt.Rd man/stat_cens.Rd man/summary.RxODE.Rd man/summary.rxDll.Rd man/uppergamma.Rd

pkgdown/favicon/apple-touch-icon-120x120.png

pkgdown/favicon/apple-touch-icon-152x152.png

pkgdown/favicon/apple-touch-icon-60x60.png

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pkgdown/favicon/apple-touch-icon.png

pkgdown/favicon/favicon-16x16.png

pkgdown/favicon/favicon-32x32.png

pkgdown/favicon/favicon.ico

po/R-RxODE.pot

po/RxODE.pot

src/Makevars.in

src/RcppExports.cpp

src/RxODE_types.h

src/WinDrive.cpp

src/blas.h

src/boost.cpp

src/box.c

src/call_dvode.c

src/cbindThetaOmega.cpp

src/cbindThetaOmega.h

src/cfode.c

src/cfode_static.c

src/cfode_static.h

src/checkmate.cpp

src/checkmate.h

src/checkmate_stub.c

src/codegen.c

src/codegen.h

src/common.c

src/common.h

src/corfailure.c

src/correction.c

src/cvPost.cpp

src/daxpy.c

src/ddot.c

src/dgefa.c

src/dgesl.c

src/dgpadm.f

src/dlsoda.f

src/dop853.c

src/dop853.h

src/dscal.c

src/dsphiv.f

src/et.cpp

src/etTran.cpp

src/ewset.c

src/expandGrid.cpp

src/expm.cpp

src/fast_factor.cpp

src/fnorm.c

src/forder.cpp

src/genModelVars.c

src/genModelVars.h

src/getOption.c

src/getOption.h

src/getTime.h

src/handle_evid.c

src/handle_evid.h

src/idamax.c

src/init.c

src/install.libs.R

src/intdy.c

src/lincmt.c

src/lincmtB.cpp

src/lincmtB1.h

src/lsoda.c

src/lsoda.h

src/lsoda_internal.h

src/matexp.f

src/matexp_HM98.c

src/methodswitch.c

src/needSortDefines.h

src/omegaChol.c

src/opkda2.f

src/orderswitch.c

src/par_solve.cpp

src/parseAssert.h

src/parseCmtProperties.h

src/parseDdt.h

src/parseDfdy.h

src/parseFuns.h

src/parseFunsDiff.h

src/parseFunsDosing.h

src/parseFunsLinCmt.h

src/parseFunsNa.h

src/parseFunsRandom.h

src/parseIdentifier.h

src/parseIndLin.h

src/parseLinCmt.c

src/parseLinCmt.h

src/parseLinCmtAB.h

src/parseLinCmtAdjustPars.h

src/parseLinCmtCl.h

src/parseLinCmtTransAlpha.h

src/parseLinCmtTransCl.h

src/parseLinCmtTransK.h

src/parseLinCmtV.h

src/parseLogical.h

src/parseStatements.h

src/parseSyntaxErrors.h

src/parseVars.h

src/phim.cpp

src/print_node.c

src/print_node.h

src/prja.c

src/qs.cpp

src/rprintf.c

src/rxData.cpp

src/rxData.h

src/rxInv.cpp

src/rxOptRep.cpp

src/rxStack.cpp

src/rxomp.h

src/rxthreefry.cpp

src/rxthreefry.h

src/rxvandercorput.cpp

src/sbuf.c

src/sbuf.h

src/scaleh.c

src/seed.cpp

src/seed.h

src/solsy.c

src/stoda.c

src/strdup_printf.c

src/strncmp.c

src/strncmp.h

src/timsort.h

src/tran.c

src/tran.g.d_parser.c

src/tran.h

src/utilc.c

src/utilcpp.cpp

src/vmnorm.c

tests/figs/deps.txt

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vignettes/.gitignore

vignettes/RxODE-cmt.Rmd vignettes/RxODE-covariates.Rmd vignettes/RxODE-data-frame.Rmd vignettes/RxODE-datasets.Rmd vignettes/RxODE-event-table.Rmd vignettes/RxODE-event-types.Rmd

vignettes/RxODE-event-types.Rmdh

vignettes/RxODE-events-classic.Rmd vignettes/RxODE-intro.Rmd vignettes/RxODE-model-types.Rmd vignettes/RxODE-nesting.Rmd vignettes/RxODE-pipeline.Rmd vignettes/RxODE-plot.Rmd vignettes/RxODE-prior-data.Rmd vignettes/RxODE-rxUse.Rmd vignettes/RxODE-shiny.Rmd vignettes/RxODE-sim-var.Rmd vignettes/RxODE-speed.Rmd vignettes/RxODE-stiff.Rmd vignettes/RxODE-syntax.Rmd vignettes/RxODE-transit-compartments.Rmd vignettes/RxODE-tutorials.Rmd vignettes/RxODE-wt.Rmd

vignettes/alpha-lincmt.csv

vignettes/build.R

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vignettes/df.Rmdh

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vignettes/events-classic.Rmdh

vignettes/events-et.Rmdh

vignettes/kel-lincmt.csv

vignettes/logo.png

vignettes/reserved-keywords.csv

vignettes/rxode-single-subject.Rmd

vignettes/syntax-functions.csv

vignettes/theo_sd.qs

nlmixrdevelopment/RxODE documentation built on April 10, 2022, 5:36 a.m.

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nlmixrdevelopment/RxODE
Facilities for Simulating from ODE-Based Models

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Facilities for Simulating from ODE-Based Models

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