Files in nolanlab/citrus
Citrus: Identification of stratifying subpopulations in Flow Cytometry Data.
.gitignore
DESCRIPTION
License.txt
NAMESPACE
R/citrus-internal.R
R/citrus.R
R/citrus.classModel.R
R/citrus.cluster.R
R/citrus.continuousModel.R
R/citrus.external.R
R/citrus.featureFunctions.R
R/citrus.full.R
R/citrus.launchUI.R
R/citrus.model.R
R/citrus.plot.R
R/citrus.survivalModel.R
R/citrus.util.R
README.mediawiki
citrus.Rproj
cleanup
configure.ac
inst/CITATION
inst/citrus.GUIDevelopLaunch.R
inst/citrus.test.R
inst/citrus.test.package.R
inst/citrus.test.survival.R
inst/extdata/example1.1/Patient01_healthy_pop1.fcs
inst/extdata/example1.1/Patient01_healthy_pop2.fcs
inst/extdata/example1.1/Patient01_healthy_pop3.fcs
inst/extdata/example1.1/Patient02_healthy_pop1.fcs
inst/extdata/example1.1/Patient02_healthy_pop2.fcs
inst/extdata/example1.1/Patient02_healthy_pop3.fcs
inst/extdata/example1.1/Patient03_healthy_pop1.fcs
inst/extdata/example1.1/Patient03_healthy_pop2.fcs
inst/extdata/example1.1/Patient03_healthy_pop3.fcs
inst/extdata/example1.1/Patient04_healthy_pop1.fcs
inst/extdata/example1.1/Patient04_healthy_pop2.fcs
inst/extdata/example1.1/Patient04_healthy_pop3.fcs
inst/extdata/example1.1/Patient05_healthy_pop1.fcs
inst/extdata/example1.1/Patient05_healthy_pop2.fcs
inst/extdata/example1.1/Patient05_healthy_pop3.fcs
inst/extdata/example1.1/Patient06_healthy_pop1.fcs
inst/extdata/example1.1/Patient06_healthy_pop2.fcs
inst/extdata/example1.1/Patient06_healthy_pop3.fcs
inst/extdata/example1.1/Patient07_healthy_pop1.fcs
inst/extdata/example1.1/Patient07_healthy_pop2.fcs
inst/extdata/example1.1/Patient07_healthy_pop3.fcs
inst/extdata/example1.1/Patient08_healthy_pop1.fcs
inst/extdata/example1.1/Patient08_healthy_pop2.fcs
inst/extdata/example1.1/Patient08_healthy_pop3.fcs
inst/extdata/example1.1/Patient09_healthy_pop1.fcs
inst/extdata/example1.1/Patient09_healthy_pop2.fcs
inst/extdata/example1.1/Patient09_healthy_pop3.fcs
inst/extdata/example1.1/Patient10_healthy_pop1.fcs
inst/extdata/example1.1/Patient10_healthy_pop2.fcs
inst/extdata/example1.1/Patient10_healthy_pop3.fcs
inst/extdata/example1.1/Patient11_diseased_pop1.fcs
inst/extdata/example1.1/Patient11_diseased_pop2.fcs
inst/extdata/example1.1/Patient11_diseased_pop3.fcs
inst/extdata/example1.1/Patient12_diseased_pop1.fcs
inst/extdata/example1.1/Patient12_diseased_pop2.fcs
inst/extdata/example1.1/Patient12_diseased_pop3.fcs
inst/extdata/example1.1/Patient13_diseased_pop1.fcs
inst/extdata/example1.1/Patient13_diseased_pop2.fcs
inst/extdata/example1.1/Patient13_diseased_pop3.fcs
inst/extdata/example1.1/Patient14_diseased_pop1.fcs
inst/extdata/example1.1/Patient14_diseased_pop2.fcs
inst/extdata/example1.1/Patient14_diseased_pop3.fcs
inst/extdata/example1.1/Patient15_diseased_pop1.fcs
inst/extdata/example1.1/Patient15_diseased_pop2.fcs
inst/extdata/example1.1/Patient15_diseased_pop3.fcs
inst/extdata/example1.1/Patient16_diseased_pop1.fcs
inst/extdata/example1.1/Patient16_diseased_pop2.fcs
inst/extdata/example1.1/Patient16_diseased_pop3.fcs
inst/extdata/example1.1/Patient17_diseased_pop1.fcs
inst/extdata/example1.1/Patient17_diseased_pop2.fcs
inst/extdata/example1.1/Patient17_diseased_pop3.fcs
inst/extdata/example1.1/Patient18_diseased_pop1.fcs
inst/extdata/example1.1/Patient18_diseased_pop2.fcs
inst/extdata/example1.1/Patient18_diseased_pop3.fcs
inst/extdata/example1.1/Patient19_diseased_pop1.fcs
inst/extdata/example1.1/Patient19_diseased_pop2.fcs
inst/extdata/example1.1/Patient19_diseased_pop3.fcs
inst/extdata/example1.1/Patient20_diseased_pop1.fcs
inst/extdata/example1.1/Patient20_diseased_pop2.fcs
inst/extdata/example1.1/Patient20_diseased_pop3.fcs
inst/extdata/example1.1/generate.R
inst/extdata/example1/Patient01_healthy.fcs
inst/extdata/example1/Patient02_healthy.fcs
inst/extdata/example1/Patient03_healthy.fcs
inst/extdata/example1/Patient04_healthy.fcs
inst/extdata/example1/Patient05_healthy.fcs
inst/extdata/example1/Patient06_healthy.fcs
inst/extdata/example1/Patient07_healthy.fcs
inst/extdata/example1/Patient08_healthy.fcs
inst/extdata/example1/Patient09_healthy.fcs
inst/extdata/example1/Patient10_healthy.fcs
inst/extdata/example1/Patient11_diseased.fcs
inst/extdata/example1/Patient12_diseased.fcs
inst/extdata/example1/Patient13_diseased.fcs
inst/extdata/example1/Patient14_diseased.fcs
inst/extdata/example1/Patient15_diseased.fcs
inst/extdata/example1/Patient16_diseased.fcs
inst/extdata/example1/Patient17_diseased.fcs
inst/extdata/example1/Patient18_diseased.fcs
inst/extdata/example1/Patient19_diseased.fcs
inst/extdata/example1/Patient20_diseased.fcs
inst/extdata/example2.1/Patient01_healthy_stim1_pop1.fcs
inst/extdata/example2.1/Patient01_healthy_stim1_pop2.fcs
inst/extdata/example2.1/Patient01_healthy_stim1_pop3.fcs
inst/extdata/example2.1/Patient01_healthy_unstim_pop1.fcs
inst/extdata/example2.1/Patient01_healthy_unstim_pop2.fcs
inst/extdata/example2.1/Patient01_healthy_unstim_pop3.fcs
inst/extdata/example2.1/Patient02_healthy_stim1_pop1.fcs
inst/extdata/example2.1/Patient02_healthy_stim1_pop2.fcs
inst/extdata/example2.1/Patient02_healthy_stim1_pop3.fcs
inst/extdata/example2.1/Patient02_healthy_unstim_pop1.fcs
inst/extdata/example2.1/Patient02_healthy_unstim_pop2.fcs
inst/extdata/example2.1/Patient02_healthy_unstim_pop3.fcs
inst/extdata/example2.1/Patient03_healthy_stim1_pop1.fcs
inst/extdata/example2.1/Patient03_healthy_stim1_pop2.fcs
inst/extdata/example2.1/Patient03_healthy_stim1_pop3.fcs
inst/extdata/example2.1/Patient03_healthy_unstim_pop1.fcs
inst/extdata/example2.1/Patient03_healthy_unstim_pop2.fcs
inst/extdata/example2.1/Patient03_healthy_unstim_pop3.fcs
inst/extdata/example2.1/Patient04_healthy_stim1_pop1.fcs
inst/extdata/example2.1/Patient04_healthy_stim1_pop2.fcs
inst/extdata/example2.1/Patient04_healthy_stim1_pop3.fcs
inst/extdata/example2.1/Patient04_healthy_unstim_pop1.fcs
inst/extdata/example2.1/Patient04_healthy_unstim_pop2.fcs
inst/extdata/example2.1/Patient04_healthy_unstim_pop3.fcs
inst/extdata/example2.1/Patient05_healthy_stim1_pop1.fcs
inst/extdata/example2.1/Patient05_healthy_stim1_pop2.fcs
inst/extdata/example2.1/Patient05_healthy_stim1_pop3.fcs
inst/extdata/example2.1/Patient05_healthy_unstim_pop1.fcs
inst/extdata/example2.1/Patient05_healthy_unstim_pop2.fcs
inst/extdata/example2.1/Patient05_healthy_unstim_pop3.fcs
inst/extdata/example2.1/Patient06_healthy_stim1_pop1.fcs
inst/extdata/example2.1/Patient06_healthy_stim1_pop2.fcs
inst/extdata/example2.1/Patient06_healthy_stim1_pop3.fcs
inst/extdata/example2.1/Patient06_healthy_unstim_pop1.fcs
inst/extdata/example2.1/Patient06_healthy_unstim_pop2.fcs
inst/extdata/example2.1/Patient06_healthy_unstim_pop3.fcs
inst/extdata/example2.1/Patient07_healthy_stim1_pop1.fcs
inst/extdata/example2.1/Patient07_healthy_stim1_pop2.fcs
inst/extdata/example2.1/Patient07_healthy_stim1_pop3.fcs
inst/extdata/example2.1/Patient07_healthy_unstim_pop1.fcs
inst/extdata/example2.1/Patient07_healthy_unstim_pop2.fcs
inst/extdata/example2.1/Patient07_healthy_unstim_pop3.fcs
inst/extdata/example2.1/Patient08_healthy_stim1_pop1.fcs
inst/extdata/example2.1/Patient08_healthy_stim1_pop2.fcs
inst/extdata/example2.1/Patient08_healthy_stim1_pop3.fcs
inst/extdata/example2.1/Patient08_healthy_unstim_pop1.fcs
inst/extdata/example2.1/Patient08_healthy_unstim_pop2.fcs
inst/extdata/example2.1/Patient08_healthy_unstim_pop3.fcs
inst/extdata/example2.1/Patient09_healthy_stim1_pop1.fcs
inst/extdata/example2.1/Patient09_healthy_stim1_pop2.fcs
inst/extdata/example2.1/Patient09_healthy_stim1_pop3.fcs
inst/extdata/example2.1/Patient09_healthy_unstim_pop1.fcs
inst/extdata/example2.1/Patient09_healthy_unstim_pop2.fcs
inst/extdata/example2.1/Patient09_healthy_unstim_pop3.fcs
inst/extdata/example2.1/Patient10_healthy_stim1_pop1.fcs
inst/extdata/example2.1/Patient10_healthy_stim1_pop2.fcs
inst/extdata/example2.1/Patient10_healthy_stim1_pop3.fcs
inst/extdata/example2.1/Patient10_healthy_unstim_pop1.fcs
inst/extdata/example2.1/Patient10_healthy_unstim_pop2.fcs
inst/extdata/example2.1/Patient10_healthy_unstim_pop3.fcs
inst/extdata/example2.1/Patient11_diseased_stim1_pop1.fcs
inst/extdata/example2.1/Patient11_diseased_stim1_pop2.fcs
inst/extdata/example2.1/Patient11_diseased_stim1_pop3.fcs
inst/extdata/example2.1/Patient11_diseased_unstim_pop1.fcs
inst/extdata/example2.1/Patient11_diseased_unstim_pop2.fcs
inst/extdata/example2.1/Patient11_diseased_unstim_pop3.fcs
inst/extdata/example2.1/Patient12_diseased_stim1_pop1.fcs
inst/extdata/example2.1/Patient12_diseased_stim1_pop2.fcs
inst/extdata/example2.1/Patient12_diseased_stim1_pop3.fcs
inst/extdata/example2.1/Patient12_diseased_unstim_pop1.fcs
inst/extdata/example2.1/Patient12_diseased_unstim_pop2.fcs
inst/extdata/example2.1/Patient12_diseased_unstim_pop3.fcs
inst/extdata/example2.1/Patient13_diseased_stim1_pop1.fcs
inst/extdata/example2.1/Patient13_diseased_stim1_pop2.fcs
inst/extdata/example2.1/Patient13_diseased_stim1_pop3.fcs
inst/extdata/example2.1/Patient13_diseased_unstim_pop1.fcs
inst/extdata/example2.1/Patient13_diseased_unstim_pop2.fcs
inst/extdata/example2.1/Patient13_diseased_unstim_pop3.fcs
inst/extdata/example2.1/Patient14_diseased_stim1_pop1.fcs
inst/extdata/example2.1/Patient14_diseased_stim1_pop2.fcs
inst/extdata/example2.1/Patient14_diseased_stim1_pop3.fcs
inst/extdata/example2.1/Patient14_diseased_unstim_pop1.fcs
inst/extdata/example2.1/Patient14_diseased_unstim_pop2.fcs
inst/extdata/example2.1/Patient14_diseased_unstim_pop3.fcs
inst/extdata/example2.1/Patient15_diseased_stim1_pop1.fcs
inst/extdata/example2.1/Patient15_diseased_stim1_pop2.fcs
inst/extdata/example2.1/Patient15_diseased_stim1_pop3.fcs
inst/extdata/example2.1/Patient15_diseased_unstim_pop1.fcs
inst/extdata/example2.1/Patient15_diseased_unstim_pop2.fcs
inst/extdata/example2.1/Patient15_diseased_unstim_pop3.fcs
inst/extdata/example2.1/Patient16_diseased_stim1_pop1.fcs
inst/extdata/example2.1/Patient16_diseased_stim1_pop2.fcs
inst/extdata/example2.1/Patient16_diseased_stim1_pop3.fcs
inst/extdata/example2.1/Patient16_diseased_unstim_pop1.fcs
inst/extdata/example2.1/Patient16_diseased_unstim_pop2.fcs
inst/extdata/example2.1/Patient16_diseased_unstim_pop3.fcs
inst/extdata/example2.1/Patient17_diseased_stim1_pop1.fcs
inst/extdata/example2.1/Patient17_diseased_stim1_pop2.fcs
inst/extdata/example2.1/Patient17_diseased_stim1_pop3.fcs
inst/extdata/example2.1/Patient17_diseased_unstim_pop1.fcs
inst/extdata/example2.1/Patient17_diseased_unstim_pop2.fcs
inst/extdata/example2.1/Patient17_diseased_unstim_pop3.fcs
inst/extdata/example2.1/Patient18_diseased_stim1_pop1.fcs
inst/extdata/example2.1/Patient18_diseased_stim1_pop2.fcs
inst/extdata/example2.1/Patient18_diseased_stim1_pop3.fcs
inst/extdata/example2.1/Patient18_diseased_unstim_pop1.fcs
inst/extdata/example2.1/Patient18_diseased_unstim_pop2.fcs
inst/extdata/example2.1/Patient18_diseased_unstim_pop3.fcs
inst/extdata/example2.1/Patient19_diseased_stim1_pop1.fcs
inst/extdata/example2.1/Patient19_diseased_stim1_pop2.fcs
inst/extdata/example2.1/Patient19_diseased_stim1_pop3.fcs
inst/extdata/example2.1/Patient19_diseased_unstim_pop1.fcs
inst/extdata/example2.1/Patient19_diseased_unstim_pop2.fcs
inst/extdata/example2.1/Patient19_diseased_unstim_pop3.fcs
inst/extdata/example2.1/Patient20_diseased_stim1_pop1.fcs
inst/extdata/example2.1/Patient20_diseased_stim1_pop2.fcs
inst/extdata/example2.1/Patient20_diseased_stim1_pop3.fcs
inst/extdata/example2.1/Patient20_diseased_unstim_pop1.fcs
inst/extdata/example2.1/Patient20_diseased_unstim_pop2.fcs
inst/extdata/example2.1/Patient20_diseased_unstim_pop3.fcs
inst/extdata/example2.1/generate.R
inst/extdata/example2/Patient01_healthy_stim1.fcs
inst/extdata/example2/Patient01_healthy_unstim.fcs
inst/extdata/example2/Patient02_healthy_stim1.fcs
inst/extdata/example2/Patient02_healthy_unstim.fcs
inst/extdata/example2/Patient03_healthy_stim1.fcs
inst/extdata/example2/Patient03_healthy_unstim.fcs
inst/extdata/example2/Patient04_healthy_stim1.fcs
inst/extdata/example2/Patient04_healthy_unstim.fcs
inst/extdata/example2/Patient05_healthy_stim1.fcs
inst/extdata/example2/Patient05_healthy_unstim.fcs
inst/extdata/example2/Patient06_healthy_stim1.fcs
inst/extdata/example2/Patient06_healthy_unstim.fcs
inst/extdata/example2/Patient07_healthy_stim1.fcs
inst/extdata/example2/Patient07_healthy_unstim.fcs
inst/extdata/example2/Patient08_healthy_stim1.fcs
inst/extdata/example2/Patient08_healthy_unstim.fcs
inst/extdata/example2/Patient09_healthy_stim1.fcs
inst/extdata/example2/Patient09_healthy_unstim.fcs
inst/extdata/example2/Patient10_healthy_stim1.fcs
inst/extdata/example2/Patient10_healthy_unstim.fcs
inst/extdata/example2/Patient11_diseased_stim1.fcs
inst/extdata/example2/Patient11_diseased_unstim.fcs
inst/extdata/example2/Patient12_diseased_stim1.fcs
inst/extdata/example2/Patient12_diseased_unstim.fcs
inst/extdata/example2/Patient13_diseased_stim1.fcs
inst/extdata/example2/Patient13_diseased_unstim.fcs
inst/extdata/example2/Patient14_diseased_stim1.fcs
inst/extdata/example2/Patient14_diseased_unstim.fcs
inst/extdata/example2/Patient15_diseased_stim1.fcs
inst/extdata/example2/Patient15_diseased_unstim.fcs
inst/extdata/example2/Patient16_diseased_stim1.fcs
inst/extdata/example2/Patient16_diseased_unstim.fcs
inst/extdata/example2/Patient17_diseased_stim1.fcs
inst/extdata/example2/Patient17_diseased_unstim.fcs
inst/extdata/example2/Patient18_diseased_stim1.fcs
inst/extdata/example2/Patient18_diseased_unstim.fcs
inst/extdata/example2/Patient19_diseased_stim1.fcs
inst/extdata/example2/Patient19_diseased_unstim.fcs
inst/extdata/example2/Patient20_diseased_stim1.fcs
inst/extdata/example2/Patient20_diseased_unstim.fcs
inst/extdata/example2/citruskey.csv
inst/extdata/example2/generate.R
inst/extdata/example3/Patient01_healthy_stim1.fcs
inst/extdata/example3/Patient01_healthy_unstim.fcs
inst/extdata/example3/Patient02_healthy_stim1.fcs
inst/extdata/example3/Patient02_healthy_unstim.fcs
inst/extdata/example3/Patient03_healthy_stim1.fcs
inst/extdata/example3/Patient03_healthy_unstim.fcs
inst/extdata/example3/Patient04_healthy_stim1.fcs
inst/extdata/example3/Patient04_healthy_unstim.fcs
inst/extdata/example3/Patient05_healthy_stim1.fcs
inst/extdata/example3/Patient05_healthy_unstim.fcs
inst/extdata/example3/Patient06_healthy_stim1.fcs
inst/extdata/example3/Patient06_healthy_unstim.fcs
inst/extdata/example3/Patient07_healthy_stim1.fcs
inst/extdata/example3/Patient07_healthy_unstim.fcs
inst/extdata/example3/Patient08_healthy_stim1.fcs
inst/extdata/example3/Patient08_healthy_unstim.fcs
inst/extdata/example3/Patient09_healthy_stim1.fcs
inst/extdata/example3/Patient09_healthy_unstim.fcs
inst/extdata/example3/Patient10_healthy_stim1.fcs
inst/extdata/example3/Patient10_healthy_unstim.fcs
inst/extdata/example3/Patient11_diseased_stim1.fcs
inst/extdata/example3/Patient11_diseased_unstim.fcs
inst/extdata/example3/Patient12_diseased_stim1.fcs
inst/extdata/example3/Patient12_diseased_unstim.fcs
inst/extdata/example3/Patient13_diseased_stim1.fcs
inst/extdata/example3/Patient13_diseased_unstim.fcs
inst/extdata/example3/Patient14_diseased_stim1.fcs
inst/extdata/example3/Patient14_diseased_unstim.fcs
inst/extdata/example3/Patient15_diseased_stim1.fcs
inst/extdata/example3/Patient15_diseased_unstim.fcs
inst/extdata/example3/Patient16_diseased_stim1.fcs
inst/extdata/example3/Patient16_diseased_unstim.fcs
inst/extdata/example3/Patient17_diseased_stim1.fcs
inst/extdata/example3/Patient17_diseased_unstim.fcs
inst/extdata/example3/Patient18_diseased_stim1.fcs
inst/extdata/example3/Patient18_diseased_unstim.fcs
inst/extdata/example3/Patient19_diseased_stim1.fcs
inst/extdata/example3/Patient19_diseased_unstim.fcs
inst/extdata/example3/Patient20_diseased_stim1.fcs
inst/extdata/example3/Patient20_diseased_unstim.fcs
inst/extdata/example3/citruskey.csv
inst/extdata/example3/generate.R
inst/extdata/example4/Patient01_Class1.fcs
inst/extdata/example4/Patient02_Class1.fcs
inst/extdata/example4/Patient03_Class1.fcs
inst/extdata/example4/Patient04_Class1.fcs
inst/extdata/example4/Patient05_Class1.fcs
inst/extdata/example4/Patient06_Class1.fcs
inst/extdata/example4/Patient07_Class1.fcs
inst/extdata/example4/Patient08_Class1.fcs
inst/extdata/example4/Patient09_Class1.fcs
inst/extdata/example4/Patient10_Class1.fcs
inst/extdata/example4/Patient11_Class2.fcs
inst/extdata/example4/Patient12_Class2.fcs
inst/extdata/example4/Patient13_Class2.fcs
inst/extdata/example4/Patient14_Class2.fcs
inst/extdata/example4/Patient15_Class2.fcs
inst/extdata/example4/Patient16_Class2.fcs
inst/extdata/example4/Patient17_Class2.fcs
inst/extdata/example4/Patient18_Class2.fcs
inst/extdata/example4/Patient19_Class2.fcs
inst/extdata/example4/Patient20_Class2.fcs
inst/extdata/example4/Patient21_Class3.fcs
inst/extdata/example4/Patient22_Class3.fcs
inst/extdata/example4/Patient23_Class3.fcs
inst/extdata/example4/Patient24_Class3.fcs
inst/extdata/example4/Patient25_Class3.fcs
inst/extdata/example4/Patient26_Class3.fcs
inst/extdata/example4/Patient27_Class3.fcs
inst/extdata/example4/Patient28_Class3.fcs
inst/extdata/example4/Patient29_Class3.fcs
inst/extdata/example4/Patient30_Class3.fcs
inst/extdata/example4/generate.R
inst/extdata/example5/DESCRIPTION
inst/extdata/example5/Patient01_healthy.fcs
inst/extdata/example5/Patient02_healthy.fcs
inst/extdata/example5/Patient03_healthy.fcs
inst/extdata/example5/Patient04_healthy.fcs
inst/extdata/example5/Patient05_healthy.fcs
inst/extdata/example5/Patient06_healthy.fcs
inst/extdata/example5/Patient07_healthy.fcs
inst/extdata/example5/Patient08_healthy.fcs
inst/extdata/example5/Patient09_healthy.fcs
inst/extdata/example5/Patient10_healthy.fcs
inst/extdata/example5/Patient11_diseased.fcs
inst/extdata/example5/Patient12_diseased.fcs
inst/extdata/example5/Patient13_diseased.fcs
inst/extdata/example5/Patient14_diseased.fcs
inst/extdata/example5/Patient15_diseased.fcs
inst/extdata/example5/Patient16_diseased.fcs
inst/extdata/example5/Patient17_diseased.fcs
inst/extdata/example5/Patient18_diseased.fcs
inst/extdata/example5/Patient19_diseased.fcs
inst/extdata/example5/Patient20_diseased.fcs
inst/extdata/example5/scores.csv
inst/shinyGUI/WWW/citrus.css
inst/shinyGUI/global.R
inst/shinyGUI/runCitrus.template
inst/shinyGUI/server.R
inst/shinyGUI/test.R
inst/shinyGUI/ui.R
m4/ac_openmp.m4
man/Citrus.Rd
man/citrus.buildEndpointModel.Rd
man/citrus.buildFoldsEndpointModels.Rd
man/citrus.calculateFeature.type.Rd
man/citrus.calculateFeatures.Rd
man/citrus.calculateFoldFeatureSet.Rd
man/citrus.checkFileParameterConsistency.Rd
man/citrus.checkFileParameterConsistencyUI.Rd
man/citrus.cluster.Rd
man/citrus.clusterAndMapFolds.Rd
man/citrus.createHierarchyGraph.Rd
man/citrus.endpointRegress.Rd
man/citrus.exportCluster.Rd
man/citrus.exportClusterUI.Rd
man/citrus.extractModelFeatures.Rd
man/citrus.familyList.Rd
man/citrus.featureTypes.Rd
man/citrus.fileEventCount.Rd
man/citrus.full.Rd
man/citrus.generateRegularizationThresholds.Rd
man/citrus.getCVMinima.Rd
man/citrus.getRelatedClusterIds.Rd
man/citrus.launchUI.Rd
man/citrus.mapToClusterSpace.Rd
man/citrus.maskCombinedFCSSet.Rd
man/citrus.modelTypes.Rd
man/citrus.plotClusteringHierarchy.Rd
man/citrus.plotClusters.Rd
man/citrus.plotHierarchicalClusterFeatureGroups.Rd
man/citrus.predict.Rd
man/citrus.readFCS.Rd
man/citrus.readFCSSet.Rd
man/citrus.selectClusters.Rd
man/citrus.selectClusters.minimumClusterSize.Rd
man/citrus.thresholdCVs.Rd
man/citrus.version.Rd
man/plot.citrus.full.result.Rd
man/plot.citrus.regressionResult.Rd
src/Makevars
src/Makevars.win
src/upsample.cc
src/util.h
