bpSim: bpSim
In nriddiford/svBreaks: Analyse structrual variant breakpoint data as produced by [svParser](https://github.com/nriddiford/svParser)
Description
Generate simulated SV breakpoints acroos genomic regions (e.g. mappable regions)
Usage
1
2
3
4
5
6
bpSim(
nSites = 1000,
byChrom = NA,
iterations = 10,
intervals = system.file("extdata", "intervals.bed", package = "svBreaks")
)
Arguments
intervals
File containing genomic regions within which to simulate SNVs [Default 'data/intervals.bed]
N
Number of random breakpoints to generate [Default nrow(bp_data)]
nriddiford/svBreaks documentation built on Dec. 29, 2021, 5:10 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
Generate simulated SV breakpoints acroos genomic regions (e.g. mappable regions)
Usage
1 2 3 4 5 6 | bpSim(
nSites = 1000,
byChrom = NA,
iterations = 10,
intervals = system.file("extdata", "intervals.bed", package = "svBreaks")
)
|
Arguments
intervals |
File containing genomic regions within which to simulate SNVs [Default 'data/intervals.bed] |
N |
Number of random breakpoints to generate [Default nrow(bp_data)] |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.