plot3DTracks: A 3D rose-plot
In ocbe-uio/cellmigRation: Track Cells, Analyze Cell Trajectories and Compute Migration Statistics

Description Usage Arguments Details Value Note Author(s) References Examples

Plotting the trajectory data of particular cells in 3D.

1	plot3DTracks(object, VS = 3, size = 2, cells, interactive = TRUE)

`object`	`CellMig` class object, which is a list of data frames resulted from the PreProcessing.
`VS`	A numeric value of the vertical separator between cells.
`size`	A numeric value of the point's size.
`cells`	A numeric vector containing the cell's numbers to be plotted.
`interactive`	logical, shall a 3D plot built in an interactive way.

The 3D visualization shows centered trajectories where the starting point of each track is located at the origin of the coordinate system (X=0,Y=0).

A 3D rose-plot showing the tracks of particular cells.

This function requires the rgl package to be installed on your system.

Salim Ghannoum salim.ghannoum@medisin.uio.no

https://www.data-pulse.com/dev_site/cellmigration/

if (Sys.info()[["sysname"]] != "Darwin") {
  # interactive shall be set to TRUE (default)
  rmTD <- get(data(preProcCellMig))
  plot3DTracks(rmTD, VS=3, size=2, cells=seq(1,5,by=1), interactive = FALSE)
}