runTrackingPermutation: Run Tracking Permutation

In ocbe-uio/cellmigRation: Track Cells, Analyze Cell Trajectories and Compute Migration Statistics

Description

Perform Internal Permutation as part of the Cell Tracking Processing

Usage

runTrackingPermutation(xyzs, maxdisp, nc, i, env)

Arguments

xyzs	data.frame, including input cell centroid positions
maxdisp	numeric, value of maximum cell dispersion in pixels
nc	numeric, value of the nc parameter
i	integer, index of the current cycle
env	environment, including all objects used for the tracking

Details

a message is printed if an issue (typically arising by a non-suitable environment being passed as the env argument) is detected. See the example below.

Value

FALSE is returned while objects in env are updated

Examples

cellmigRation:::runTrackingPermutation(data.frame(1), 1, 1, 1, new.env())

ocbe-uio/cellmigRation documentation built on Dec. 16, 2021, 10:59 p.m.