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oirot/tumorHeatmap: Visual comparison of mutational processes in a set of tumors

Allows to compute the exposure vectors from an MPF file and to plot an heatmap, clustering the different tumor genomes by their similarities in the exposure vectors. The exposure vectors can be calculated using different signature types (Shiraishi, Alexandrov V2 and Alexandrov V3.2). Based on the package decompTumor2Sig.

README.md

Vignettes Man pages API and functions Files

Package details
Bioconductor views	BiologicalQuestion BiomedicalInformatics Clustering DNASeq Genetics GenomicVariation SNP Sequencing Software SomaticMutation StatisticalMethod
Maintainer
License	CC0
Version	0.99.0
Package repository	View on GitHub
Installation	Install the latest version of this package by entering the following in R: `install.packages("remotes") remotes::install_github("oirot/tumorHeatmap")`