phsc.get.pairwise.relationships.keff.and.neff: Count observed relationship states
In olli0601/phyloscan:
View source: R/phyloscan.fun.private.R
phsc.get.pairwise.relationships.keff.and.neff R Documentation
Count observed relationship states
Description
This function counts for each pair of individuals their relationship states across all windows (KEFF), and the total number of windows (NEFF). Since windows can be overlapping, the count is a real value.
Usage
phsc.get.pairwise.relationships.keff.and.neff(df, get.groups, w.slide = NA)
Arguments
df
data.table with basic relationship types for paired individuals across windows. Must contain columns 'ID1','ID2','W_FROM','W_TO','TYPE_BASIC'.
get.groups
names of relationship groups
Value
new data.table with columns ID1 ID2 GROUP TYPE K KEFF N NEFF.
olli0601/phyloscan documentation built on April 14, 2024, 5:19 p.m.
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View source: R/phyloscan.fun.private.R
| phsc.get.pairwise.relationships.keff.and.neff | R Documentation |
Count observed relationship states
Description
This function counts for each pair of individuals their relationship states across all windows (KEFF), and the total number of windows (NEFF). Since windows can be overlapping, the count is a real value.
Usage
phsc.get.pairwise.relationships.keff.and.neff(df, get.groups, w.slide = NA)
Arguments
df |
data.table with basic relationship types for paired individuals across windows. Must contain columns 'ID1','ID2','W_FROM','W_TO','TYPE_BASIC'. |
get.groups |
names of relationship groups |
Value
new data.table with columns ID1 ID2 GROUP TYPE K KEFF N NEFF.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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