flip_allele: 'align_allele' given a data.table of pid,a1,a2 get a list of...
In ollyburren/cupcake: PCA for GWAS
Description
Usage
Arguments
Value
View source: R/align_alleles.R
Description
align_allele given a data.table of pid,a1,a2 get a list of SNPs where alleles are flipped wrt to basis reference
Usage
1
flip_allele(DT, ref.DT)
Arguments
DT
- a data.table object - columns chr,position,a1 and a2
ref.DT
- a data.table of reference alleles (see details)
Value
an index wrt to DT of OR that require flipping
ollyburren/cupcake documentation built on July 30, 2020, 9:58 a.m.
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Description Usage Arguments Value
View source: R/align_alleles.R
Description
align_allele given a data.table of pid,a1,a2 get a list of SNPs where alleles are flipped wrt to basis reference
Usage
1 | flip_allele(DT, ref.DT)
|
Arguments
DT |
- a data.table object - columns chr,position,a1 and a2 |
ref.DT |
- a data.table of reference alleles (see details) |
Value
an index wrt to DT of OR that require flipping
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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