simulate_beta: simulate betas for an ld block 'simulate_beta' use the...
In ollyburren/cupcake: PCA for GWAS
Description
Usage
Arguments
Value
Description
simulate betas for an ld block
simulate_beta use the multivariate normal to simulate realistic betas
Usage
1
simulate_beta(sm, lor, se_lor, lor_shrink = 1, n_sims)
Arguments
sm
a snpMatrix object
lor
a vector - observed betas
se_lor
a vector - standard error of betas
lor_shrink
a vector - shrinkage values to use to adjust betas (default 1 no shrinkage)
n_sims
a scalar - number of simulations to conduct
Value
a matrix of simulated betas
ollyburren/cupcake documentation built on July 30, 2020, 9:58 a.m.
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Description Usage Arguments Value
Description
simulate betas for an ld block
simulate_beta use the multivariate normal to simulate realistic betas
Usage
1 | simulate_beta(sm, lor, se_lor, lor_shrink = 1, n_sims)
|
Arguments
sm |
a snpMatrix object |
lor |
a vector - observed betas |
se_lor |
a vector - standard error of betas |
lor_shrink |
a vector - shrinkage values to use to adjust betas (default 1 no shrinkage) |
n_sims |
a scalar - number of simulations to conduct |
Value
a matrix of simulated betas
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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