plotLUS: plotLUS

In oyvble/euroformix: A Quantitative Model for Interpreting DNA Mixtures

plotLUS

Description

A dataplotter for MPS data

Usage

plotLUS(mixData, sn = "", refData = NULL, threshT = 0, LUSsymbol = "_")

Arguments

mixData	List object of [[sampleName]][[locus]] =list(adata,hdata), Allele vector adata (can be strings or numeric), intensity vector hdata (must be numeric)
sn	The Sample name, will be plotted in title.
refData	Condition on a list$refname$locname$adata of reference alleles which are labeled in EPG
threshT	The detection threshold can be shown in gray in the plot.
LUSsymbol	The separator for each allele. Assumed to be "_" separating sequence variant and LUS.

Details

Plots peak height with corresponding allele variant for one sample

Author(s)

Oyvind Bleka

oyvble/euroformix documentation built on April 13, 2025, 3:18 a.m.