Files in oyvble/euroformix
A Quantitative Model for Interpreting DNA Mixtures
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/Qassignate.R
R/calcGjoint.R
R/calcINT.R
R/calcLRint.R
R/calcLRmcmc.R
R/calcLRmle.R
R/calcLRupper.R
R/calcMLE.R
R/calcQual.R
R/calcQualMLE.R
R/calcRMPfst.R
R/calcTippet.R
R/combineRank.R
R/contLikINT.R
R/contLikMCMC.R
R/contLikMLE.R
R/contLikSearch.R
R/deconvolve.R
R/efm.R
R/efm_DBsearch.R
R/efm_createReport.R
R/efm_gfile.R
R/exactMACdistr.R
R/fitgammamodel.R
R/freqImport.R
R/genDataset.R
R/getGlist.R
R/getKit.R
R/getMarkerVal.R
R/getParamLimits.R
R/getSampleType.R
R/helpfunctions.R
R/logLiki.R
R/plotEPG.R
R/plotEPG2.R
R/plotLUS.R
R/plotMPS2.R
R/plotSumPH.R
R/plotTippet.R
R/plotTopEPG.R
R/plotTopEPG2.R
R/plotTopLUS.R
R/plotTopMPS2.R
R/prepareC.R
R/prepareData.R
R/runexample.R
R/sample_listToTable.R
R/sample_tableToList.R
R/setVecRightOrder.R
R/simDOdistr.R
R/tableReader.R
R/tableSaver.R
R/validMCMC.R
R/validMLEmodel.R
README.Rmd
README.md
inst/FreqDatabases/ESX17_Norway.csv
inst/FreqDatabases/Fusion6C_Norway.csv
inst/FreqDatabases/Identifiler_Caucasian.csv
inst/FreqDatabases/Identifiler_NIST.csv
inst/FreqDatabases/NGM_Holland.csv
inst/FreqDatabases/SGMPlus_Norway.csv
inst/FreqDatabases/SGMPlus_UK.csv
inst/examples/ESX17_3p.csv
inst/examples/ESX17_3pR.csv
inst/examples/ESX17_evids_LTDNA.csv
inst/examples/ESX17_freq.csv
inst/examples/ESX17_refs.csv
inst/examples/ESX17_refs_LTDNA.csv
inst/examples/ESX17_refs_missing.csv
inst/examples/ForenSeq_evids.csv
inst/examples/ForenSeq_freq.csv
inst/examples/ForenSeq_refs.csv
inst/examples/GF_evid.csv
inst/examples/GF_freq.csv
inst/examples/GF_refs.csv
inst/examples/SGMPlus_freq.csv
inst/examples/SGMplus_evids_LTDNA.csv
inst/examples/SGMplus_refs_LTDNA.csv
inst/examples/SNP_evids.csv
inst/examples/SNP_freq.csv
inst/examples/SNP_refs.csv
inst/examples/test_evid1.csv
inst/examples/test_evids.csv
inst/examples/test_freq.csv
inst/examples/test_ref1.csv
inst/examples/test_ref1_missing.csv
inst/examples/test_refs.csv
inst/extdata/kit.txt
inst/tutorialdata/EFM4proj_imported.Rdata
inst/tutorialdata/ESX17_Norway.csv
inst/tutorialdata/ESX17_NorwayAMEL.csv
inst/tutorialdata/databaseESX17.txt
inst/tutorialdata/refs.csv
inst/tutorialdata/stain.txt
man/Qassignate.Rd
man/calcGjoint.Rd
man/calcINT.Rd
man/calcLRint.Rd
man/calcLRmcmc.Rd
man/calcLRmle.Rd
man/calcLRupper.Rd
man/calcMLE.Rd
man/calcQual.Rd
man/calcQualMLE.Rd
man/calcRMPfst.Rd
man/calcTippet.Rd
man/combineRank.Rd
man/contLikINT.Rd
man/contLikMCMC.Rd
man/contLikMLE.Rd
man/contLikSearch.Rd
man/deconvolve.Rd
man/efm.Rd
man/efm_DBsearch.Rd
man/efm_createReport.Rd
man/efm_gfile.Rd
man/exactMACdistr.Rd
man/figures/efmlogo.png
man/fitgammamodel.Rd
man/freqImport.Rd
man/genDataset.Rd
man/getGlist.Rd
man/getKit.Rd
man/getMarkerVal.Rd
man/getParamLimits.Rd
man/getSampleType.Rd
man/logLiki.Rd
man/plotEPG.Rd
man/plotEPG2.Rd
man/plotLUS.Rd
man/plotMPS2.Rd
man/plotSumPH.Rd
man/plotTippet.Rd
man/plotTopEPG.Rd
man/plotTopEPG2.Rd
man/plotTopLUS.Rd
man/plotTopMPS2.Rd
man/prepareC.Rd
man/prepareData.Rd
man/runexample.Rd
man/sample_listToTable.Rd
man/sample_tableToList.Rd
man/setVecRightOrder.Rd
man/simDOdistr.Rd
man/tableReader.Rd
man/tableSaver.Rd
man/validMCMC.Rd
man/validMLEmodel.Rd
src/EFMfastengine.cpp
src/Makevars
src/Makevars.win
src/calcQual1marker.cpp
src/calcQuan_allcomb2.cpp
src/calcQuan_cumprob.cpp
src/genoProbFuns.cpp
src/genoProbFuns.h
src/getContributionIndices.cpp
src/getContributionIndices.h
tests/helpfunctions.R
tests/likQualR.R
tests/testthat.R
tests/testthat/donttest_QualLogLik2contr2Rep.R
tests/testthat/donttest_QualWithForensim.R
tests/testthat/donttest_logLik4contr1Rep_noQref.R
tests/testthat/test_CppCodeExamples.R
tests/testthat/test_CppCodeSanitycheck.R
tests/testthat/test_LTDNA.R
tests/testthat/test_LTDNAreps.R
tests/testthat/test_calcGjoint.R
tests/testthat/test_calcQual.R
tests/testthat/test_fitgammamodel.R
tests/testthat/test_logLik1contr.R
tests/testthat/test_logLik1contr_noDropin.R
tests/testthat/test_logLik1contr_noQ.R
tests/testthat/test_logLik1contr_withAMEL.R
tests/testthat/test_logLik2contr1RepNoStutter.R
tests/testthat/test_logLik2contr2Rep.R
tests/testthat/test_logLik2contr2RepSNP.R
tests/testthat/test_logLik3contr2RepLUS.R
