plotTopLUS: plotTopLUS
In oyvble/euroformix: A Quantitative Model for Interpreting DNA Mixtures
plotTopLUS R Documentation
plotTopLUS
Description
A dataplotter for MPS data with LUS format
Usage
plotTopLUS(MLEobj, DCobj = NULL, threshT = 0, LUSsymbol = "_")
Arguments
MLEobj
An object returned from contLikMLE
DCobj
An object returned from devonvolve: Must be run with same object as MLEobj
threshT
The detection threshold can be shown in gray in the plot.
LUSsymbol
The separator for each allele. Assumed to be "_" separating sequence variant and LUS.
Details
Plots the expected coverage reads of the top genotypes. The coverage reads for corresponding alleles (one sample) are superimposed.
Author(s)
Oyvind Bleka
oyvble/euroformix documentation built on Aug. 25, 2023, 11:14 a.m.
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| plotTopLUS | R Documentation |
plotTopLUS
Description
A dataplotter for MPS data with LUS format
Usage
plotTopLUS(MLEobj, DCobj = NULL, threshT = 0, LUSsymbol = "_")
Arguments
MLEobj |
An object returned from contLikMLE |
DCobj |
An object returned from devonvolve: Must be run with same object as MLEobj |
threshT |
The detection threshold can be shown in gray in the plot. |
LUSsymbol |
The separator for each allele. Assumed to be "_" separating sequence variant and LUS. |
Details
Plots the expected coverage reads of the top genotypes. The coverage reads for corresponding alleles (one sample) are superimposed.
Author(s)
Oyvind Bleka
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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