In pbs-assess/gfsynopsis: Data Synopsis Reports for PBS Groundfish

Timeline of MSSM survey changes {#app:change-table}

mssm_survey_changes <- readr::read_csv(here::here('report', 'mssm-tech-report', 'data', 'mssm-survey-changes.csv')) |>
  dplyr::select(Year, Change, Details) |>
  filter(Change != "None") |>
  mutate(Details = tidyr::replace_na(Details, '-')) |>
  mutate(Change = gsub('\\(minor\\)', '', Change))

csasdown::csas_table(mssm_survey_changes, caption = "Summary of changes to the Multispecies Small-Mesh Bottom Trawl Survey (MSSM). These changes are compiled from Rutherford et al. In prep.", format = "latex") |>
  kableExtra::column_spec(1, width = "1.5cm") |>
  kableExtra::column_spec(2, width = "4.3cm") |>
  kableExtra::column_spec(3, width = "9.3cm")

\clearpage

Size distributions over time {#app:size-time}

Comparison of fish lengths sampled in the MSSM and SYN WCVI surveys over time.

(ref:size-time0-cap) Same as Figure \@ref(fig:size-dist-time) for additional species.

(ref:size-time1-cap) Same as Figure \@ref(fig:size-dist-time) for additional species.

(ref:size-time2-cap) Same as Figure \@ref(fig:size-dist-time) for additional species.

(ref:size-time3-cap) Same as Figure \@ref(fig:size-dist-time) for additional species.

knitr::include_graphics(here::here("report/mssm-tech-report/figure/size-time-0.png"), dpi = NA)

knitr::include_graphics(here::here("report/mssm-tech-report/figure/size-time-1.png"), dpi = NA)

knitr::include_graphics(here::here("report/mssm-tech-report/figure/size-time-2.png"), dpi = NA)

knitr::include_graphics(here::here("report/mssm-tech-report/figure/size-time-3.png"), dpi = NA)

pbs-assess/gfsynopsis documentation built on March 26, 2024, 7:30 p.m.