Files in pierrejacob/debiasedmcmc
Unbiased MCMC with couplings

.Rbuildignore
.Rprofile
.gitignore
DESCRIPTION
NAMESPACE
R/H_bar.R R/RcppExports.R R/bayesianlasso.R R/c_chains_to_dataframe.R R/c_chains_to_measure_as_list.R R/coupled_chains.R R/coupled_pairs01.R R/gamma_couplings.R R/get_max_coupling.R R/get_mh_kernels.R R/histogram_c_chains.R R/invgamma_couplings.R R/invgaussian_couplings.R R/ising.R R/logistic_regression.R R/meetingtime.R R/mvnorm.R R/mvnorm_couplings.R R/rnorm_max_coupling.R R/rnorm_reflectionmax.R R/unbiasedestimator.R R/unbiasedmcmc-package.R R/utils.R R/variableselection.R README.Rmd README.md
README_files/figure-gfm/estimators-1.png
README_files/figure-gfm/usage-1.png
README_files/figure-gfm/usage-2.png
data/diabetes.RData
data/germancredit.RData
inst/README.R inst/check/check_discretecouplings.R inst/check/check_gamma.R inst/check/check_hbar.R inst/check/check_histograms.R inst/check/check_inversegamma.R inst/check/check_inversegaussian.R inst/check/check_ising.R inst/check/check_lags.R inst/check/check_mvnorm.R inst/check/check_normalcouplings.R inst/check/check_reflmaxcoupling.R inst/check/check_rwmh_bivariate.R inst/check/check_rwmh_doublewell.R inst/check/check_rwmh_minimalcode.R inst/check/check_rwmh_univariate.R inst/check/check_vs_mlikelihood.R inst/check/check_weirdbug.R inst/check/to_check_signed_measure.R inst/reproducebaseball/baseball.mcmc.run.R inst/reproducebaseball/baseball.plots.R inst/reproducebaseball/baseball.run.R inst/reproducebaseball/run.all.R inst/reproducebayesianlasso/bayesianlasso.mcmc.run.R inst/reproducebayesianlasso/bayesianlasso.plots.R inst/reproducebayesianlasso/bayesianlasso.run.R inst/reproducebayesianlasso/run.all.R inst/reproducebimodal/bimodal.mcmc.run.R inst/reproducebimodal/bimodal.plots.R inst/reproducebimodal/bimodal.run.R inst/reproducebimodal/run.all.R inst/reproduceepidemiology/plummer.cut.plots.R inst/reproduceepidemiology/plummer.cut.run.R inst/reproduceepidemiology/run.all.R
inst/reproducegermancredit/german_credit.csv
inst/reproducegermancredit/germancredit.mcmc.run.R inst/reproducegermancredit/germancredit.plots.R inst/reproducegermancredit/germancredit.preparedata.R inst/reproducegermancredit/germancredit.run.R inst/reproducegermancredit/run.all.R inst/reproduceisingmodel/ising.gibbs.meetings.run.R inst/reproduceisingmodel/ising.mcmc.run.R inst/reproduceisingmodel/ising.plots.R inst/reproduceisingmodel/ising.swap.meetings.run.R inst/reproduceisingmodel/run.all.R inst/reproduceisingmodel/run.batch.ising.R
inst/reproduceisingmodel/run.odyssey.ising.sh
inst/reproducepumpfailures/pumpfailures.mcmc.run.R inst/reproducepumpfailures/pumpfailures.mykland.run.R inst/reproducepumpfailures/pumpfailures.plots.R inst/reproducepumpfailures/pumpfailures.run.R inst/reproducepumpfailures/pumpfailures.tuning.run.R inst/reproducepumpfailures/run.all.R inst/reproducescalingdimension/run.all.R inst/reproducescalingdimension/scaling.gibbs.R inst/reproducescalingdimension/scaling.hmc.R inst/reproducescalingdimension/scaling.plots.R inst/reproducescalingdimension/scaling.rwmh.maximalcoupling.R inst/reproducescalingdimension/scaling.rwmh.reflectionmaxcoupling.R inst/reproducevarselection/run.all.R inst/reproducevarselection/varselection.clusterscript.kappas.R inst/reproducevarselection/varselection.differentkappas.R inst/reproducevarselection/varselection.differentkappas.plots.R inst/reproducevarselection/varselection.differentp.R inst/reproducevarselection/varselection.differentp.plots.R inst/reproducevarselection/varselection.generatedata.run.R inst/reproducevarselection/varselection.mcmc.run.R inst/reproducevarselection/varselection.script.R inst/reproducevarselection/varselection.tables.R man/H_bar.Rd man/c_chains_to_dataframe.Rd man/c_chains_to_measure_as_list.Rd man/dinversegamma.Rd man/dinvgaussian.Rd man/expit.Rd man/fast_dmvnorm.Rd man/fast_dmvnorm_chol_inverse.Rd man/fast_rmvnorm.Rd man/fast_rmvnorm_chol.Rd man/get_blasso.Rd man/get_max_coupling.Rd man/get_mh_kernel.Rd man/get_variableselection.Rd man/hello.Rd man/histogram_c_chains.Rd man/logistic_precomputation.Rd man/pg_gibbs.Rd man/rcpp_hello.Rd man/rgamma_coupled.Rd man/rinversegamma.Rd man/rinversegamma_coupled.Rd man/rinvgaussian.Rd man/rinvgaussian_coupled.Rd man/rmvnorm_max.Rd man/rmvnorm_max_chol.Rd man/rmvnorm_reflectionmax.Rd man/rnorm_max_coupling.Rd man/rnorm_reflectionmax.Rd man/sample_coupled_chains.Rd man/sample_meetingtime.Rd man/sample_unbiasedestimator.Rd man/setmytheme.Rd man/unbiasedmcmc-package.Rd
src/PolyaGamma.cpp
src/PolyaGamma.h
src/RNG.cpp
src/RNG.h
src/RRNG.cpp
src/RRNG.h
src/RcppExports.cpp
src/blassoutil.cpp
src/c_chains_to_measure.cpp
src/estimator_bin.cpp
src/inversegaussian.cpp
src/ising.cpp
src/logisticregression.cpp
src/logisticregressioncoupling.cpp
src/mvnorm.cpp
src/mvnorm.h
src/propensityscore.cpp
src/prune.cpp
src/sample_pairs01.cpp
src/vs_mlikelihood.cpp
unbiasedmcmc.Rproj
vignettes/.gitignore
vignettes/introduction-normaltarget.Rmd vignettes/polyagammagibbs.Rmd
pierrejacob/debiasedmcmc documentation built on Aug. 22, 2022, 12:41 a.m.