Files in plbaldoni/mixNBHMM
Differential Peak Calling via Hidden Markov Model With Mixture of Negative Binomial Distributions
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/ENCODE.R
R/RcppExports.R
R/base.R
R/controlEM.R
R/createOffset.R
R/cutoff.R
R/fdrControl.R
R/hg19.blacklist.v2.R
R/mixNBHMM.R
R/mixNBHMMDataSetFromBam.R
R/mixZINBHMM.R
R/plotPeaks.R
R/simulateHMM.R
R/summarizePeaks.R
README.Rmd
README.md
data/.gitignore
data/ENCODE.RData
data/hg19.blacklist.v2.RData
man/ENCODE.Rd
man/controlEM.Rd
man/createOffset.Rd
man/cutoff.Rd
man/fdrControl.Rd
man/figures/README-viz-1.png
man/hg19.blacklist.v2.Rd
man/mixNBHMM.Rd
man/mixNBHMMDataSetFromBam.Rd
man/mixZINBHMM.Rd
man/plotPeaks.Rd
man/simulateHMM.Rd
man/summarizePeaks.Rd
mixNBHMM.Rproj
src/RcppExports.cpp
src/base.cpp
