Files in ploverso-pgdx/savR
Parse and analyze Illumina SAV files
.Rbuildignore
.gitignore
CHANGES
DESCRIPTION
NAMESPACE
R/AllClasses.R
R/AllGenerics.R
R/SavR-accessors.R
R/savR-methods.R
R/savR-package.R
R/show-methods.R
README.md
inst/extdata/MiSeq/InterOp/CorrectedIntMetricsOut.bin
inst/extdata/MiSeq/InterOp/ExtractionMetricsOut.bin
inst/extdata/MiSeq/InterOp/QMetricsOut.bin
inst/extdata/MiSeq/InterOp/TileMetricsOut.bin
inst/extdata/MiSeq/RunInfo.xml
man/buildReports.Rd
man/clusterQualityGtN.Rd
man/clusters.Rd
man/correctedIntensities.Rd
man/cycles.Rd
man/directions.Rd
man/errorMetrics.Rd
man/extractionMetrics.Rd
man/flowcellLayout.Rd
man/illuminaFlowCellLayout-class.Rd
man/illuminaRead-class.Rd
man/location.Rd
man/pfBoxplot.Rd
man/pfClusters.Rd
man/plotFWHM.Rd
man/plotIntensity.Rd
man/plotQGT30.Rd
man/qualityHeatmap.Rd
man/qualityMetrics.Rd
man/reads.Rd
man/run.Rd
man/savCorrectedIntensityFormat-class.Rd
man/savData-class.Rd
man/savErrorFormat-class.Rd
man/savExtractionFormat-class.Rd
man/savFormat-class.Rd
man/savProject-class.Rd
man/savQualityFormat-class.Rd
man/savQualityFormatV5-class.Rd
man/savR-package.Rd
man/savR.Rd
man/savTileFormat-class.Rd
man/tileMetrics.Rd
tests/testthat.R
tests/testthat/test_accessors.R
tests/testthat/test_load.R
vignettes/savR.Rnw
