savR: Build a SAV project

In ploverso-pgdx/savR: Parse and analyze Illumina SAV files

Description

Constructor to build a savProject-class object and populate it. A SAV project consists of binary files generated by an Illumina sequencing run and placed in a folder named "InterOp". This folder contains a number of ".bin" files that contain statistics about the run. Creating this object parses all of the files and makes the data available for analysis.

Usage

savR(object)

## S4 method for signature 'character'
savR(object)

## S4 method for signature 'missing'
savR()

Arguments

object

String Path to Flowcell data

Examples

fc <- savR(system.file("extdata", "MiSeq", package="savR"))
fc

ploverso-pgdx/savR documentation built on May 25, 2019, 8:22 a.m.