priesgo/TCGAome: MultiOmics (just RNAseq and RPPA...) Data Analyzer on TCGA data
Version 0.0.0.9000

The package downloads RNAseq, RPPA and clinical TCGA datasets for a given set of tumor types, preprocess it, analyzes it with sPLS and MCIA and finally computes GO enrichment and visualizes enriched GO terms based on semantic and functional distances between terms.

Getting started

Package details

Maintainer
LicenseMIT
Version0.0.0.9000
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("priesgo/TCGAome")
priesgo/TCGAome documentation built on May 24, 2017, 11:20 a.m.