get_term_distance_matrix: get_term_distance_matrix()

In priesgo/TCGAome: MultiOmics (just RNAseq and RPPA...) Data Analyzer on TCGA data

Description

Function that returns the distance matrix between all the terms.

Usage

get_term_distance_matrix(x, distance_measure, ..., terms_subset = NULL)

Arguments

x	The GeneAnnotations class on which the method will run.
distance_measure	The binary distance method (one of UI, binary, bray-curtis, cosine)
terms_subset	A subset of terms on which to calculate the distance matrix

Value

The distance matrix for the subset if provided or for all the terms otherwise

Examples

kegg <- TCGAome::load_kegg()
get_term_distance_matrix(kegg, "cosine")

priesgo/TCGAome documentation built on May 25, 2019, 11:26 a.m.